FFCP PHASE1:Hg19::chrX:2670066..2670132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7499 | |EntrezGene=7499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12806 | |HGNC=12806 | ||
|TSSclassifier=strong | |||
|UniProt=P55808,B4E289 | |UniProt=P55808,B4E289 | ||
|association_with_transcript=0bp_to_ENST00000381174,ENST00000419513,ENST00000426774,NM_001141919,NM_001141920,NM_175569,uc004cqp.2,uc010ndb.2,uc011mhg.1_5end | |association_with_transcript=0bp_to_ENST00000381174,ENST00000419513,ENST00000426774,NM_001141919,NM_001141920,NM_175569,uc004cqp.2,uc010ndb.2,uc011mhg.1_5end | ||
|cluster_id=chrX:2670066..2670132,+ | |||
|coexpression_cluster_id=C2028 | |||
|description=CAGE_peak_1_at_XG_5end | |description=CAGE_peak_1_at_XG_5end | ||
|id=chrX:2670066..2670132,+ | |id=chrX:2670066..2670132,+ | ||
|ontology_enrichment_celltype=CL:0002334!3.50e-15!12;CL:1000306!3.28e-08!4;CL:0002547!3.28e-08!4;CL:0002580!4.03e-07!3 | |ontology_enrichment_celltype=CL:0002334!3.50e-15!12;CL:1000306!3.28e-08!4;CL:0002547!3.28e-08!4;CL:0002580!4.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.29e-19;12!CL:0000136;2.05e-10;13!CL:1000306;3.15e-10;4!CL:0002547;3.15e-10;4!CL:0002580;8.15e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.30e-19,12;CL:1000306,3.08e-10,4;CL:0002547,3.08e-10,4;CL:0002580,8.05e-09,3;CL:0000136,8.56e-09,15;CL:0000057,8.42e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.09e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.01e-07;3!DOID:0060084;1.54e-07;3!DOID:127;1.54e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.02e-07,3;DOID:0060084,1.47e-07,3;DOID:127,1.47e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000310!1.63e-11!10;UBERON:0001443!2.69e-10!11;UBERON:0003134!1.56e-08!37;UBERON:0000474!1.56e-08!37;UBERON:0000415!3.28e-08!4;UBERON:0007240!3.28e-08!4;UBERON:0005742!3.28e-08!4;UBERON:0005734!3.28e-08!4;UBERON:0004664!3.28e-08!4;UBERON:0004663!3.28e-08!4;UBERON:0003100!2.67e-07!41;UBERON:0005795!3.62e-07!22;UBERON:0003975!3.98e-07!22 | |ontology_enrichment_uberon=UBERON:0000310!1.63e-11!10;UBERON:0001443!2.69e-10!11;UBERON:0003134!1.56e-08!37;UBERON:0000474!1.56e-08!37;UBERON:0000415!3.28e-08!4;UBERON:0007240!3.28e-08!4;UBERON:0005742!3.28e-08!4;UBERON:0005734!3.28e-08!4;UBERON:0004664!3.28e-08!4;UBERON:0004663!3.28e-08!4;UBERON:0003100!2.67e-07!41;UBERON:0005795!3.62e-07!22;UBERON:0003975!3.98e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;8.64e-15;10!UBERON:0001443;2.71e-13;11!UBERON:0004797;3.15e-10;4!UBERON:0000415;3.15e-10;4!UBERON:0007240;3.15e-10;4!UBERON:0005742;3.15e-10;4!UBERON:0005734;3.15e-10;4!UBERON:0004664;3.15e-10;4!UBERON:0004663;3.15e-10;4!UBERON:0002072;3.06e-08;5!UBERON:0002199;1.95e-07;46!UBERON:0002416;1.95e-07;46!UBERON:0003688;8.92e-07;6!UBERON:0002358;8.92e-07;6!UBERON:0003684;8.92e-07;6!UBERON:0001178;8.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,8.33e-15,10;UBERON:0001443,2.62e-13,11;UBERON:0000415,3.08e-10,4;UBERON:0007240,3.08e-10,4;UBERON:0005742,3.08e-10,4;UBERON:0005734,3.08e-10,4;UBERON:0004664,3.08e-10,4;UBERON:0004663,3.08e-10,4;UBERON:0002072,3.12e-08,5;UBERON:0005795,4.71e-08,22;UBERON:0003975,5.28e-08,22;UBERON:0002199,5.45e-08,46;UBERON:0002416,5.45e-08,46;UBERON:0003102,2.72e-07,99;UBERON:0000995,6.33e-07,21;UBERON:0003134,6.77e-07,37;UBERON:0000474,6.77e-07,37;UBERON:0004175,8.29e-07,25;UBERON:0003688,9.13e-07,6;UBERON:0002358,9.13e-07,6;UBERON:0003684,9.13e-07,6;UBERON:0001178,9.13e-07,6 | |||
|phase1_expression=126.629830351578,69.5826702645695,12.4039875604455,87.0637695672235,0,0,0,84.0187431657685,18.0218083457889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.614471025339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30117297553062,1.38856200643038,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,30.3152890534144,40.6483942443301,45.8135765613737,43.3123297330709,25.5361235182817,0,0,0,0,0,0,0,0,0,0,22.818872861778,80.1044927757654,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4134181429018,0,0,0,32.469524059684,35.2369691550636,0,0,0,0,0,0,0,0,0,0,0,0,0,126.199337115633,75.5506754036612,0,0,0,0,0,0,0,0,7.71889125831462,9.66944449467364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.4410519545717,52.275065654048,0,0,0,0,0,0,0,0,0,7.90204397959275,6.00940313466411,0,0,0,0,44.8512282290955,0,0,0,0,0.492663237895943,0,1.24396869324463,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,22.8219048065149,38.6566088802437,0,40.6468386554563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0053746137955,0,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,31.6227335069944,0,121.572825831201,145.788874623659,102.160274373639,17.8113417465424,121.274618028809,0,35.6203359467978,32.229826004755,73.5105542796346,56.7498648055421,0,63.3346562606778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1730501818735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3928466831969,0,0,0,0,0,0,0,20.3414609916437,116.889452831778,0,0,0,0,0,0.92947049429925,0,0,0,0,13.4809204346827,0,0,0,0,5.29221619990316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.7228193862857,0,0,0,0,0,0,0,0,0,14.8443823818583,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,2.50962739701486,7.54112533337211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1593289814244,0,0,0,0,0,0,0,0,7.46306874841063,0.489961987071888,0,0,0,0,0,0,0,0,2.48578814858586,0,0,0,29.9193615584249,2.56508224804908,0,0,0.288180834308212,0,0,0,0,12.727477869307,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,3.35434687599266,0.394028536495991,0,0,0,0,0,0,0,3.80099721227599,89.8790350849319,11.7571449639387,0,0,52.8202867534807,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8518013820931,1.08803560673895,0,1.22538230705385,0,0,0,0,0,0,0.554645257684261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0,6.21051827505038,0,13.8237691570157,0,0.300515217994437,0,2.84809513243263,0,0,0,0,13.6009439985472,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.7411291724682,5.0880696104547,0,0,8.8168985922671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0,6.65352387976704,0,0,0,0,0,0,0,225.818677757753,0.127762427639595,0.535701835878287,0,0,0,6.29786828154736,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.6828739083758,12.4426739126537,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5713297917742,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,2.0793248022896,0.4226557275834,0,0,0,0.199882311849858,0,28.2315897372553,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,8.21359922604674,0,0,0,0,0,0,0,0,0.611207220914332,5.69654649642034,1.99727032255654,0,0 | |phase1_expression=126.629830351578,69.5826702645695,12.4039875604455,87.0637695672235,0,0,0,84.0187431657685,18.0218083457889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.614471025339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30117297553062,1.38856200643038,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,30.3152890534144,40.6483942443301,45.8135765613737,43.3123297330709,25.5361235182817,0,0,0,0,0,0,0,0,0,0,22.818872861778,80.1044927757654,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4134181429018,0,0,0,32.469524059684,35.2369691550636,0,0,0,0,0,0,0,0,0,0,0,0,0,126.199337115633,75.5506754036612,0,0,0,0,0,0,0,0,7.71889125831462,9.66944449467364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.4410519545717,52.275065654048,0,0,0,0,0,0,0,0,0,7.90204397959275,6.00940313466411,0,0,0,0,44.8512282290955,0,0,0,0,0.492663237895943,0,1.24396869324463,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,22.8219048065149,38.6566088802437,0,40.6468386554563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0053746137955,0,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,31.6227335069944,0,121.572825831201,145.788874623659,102.160274373639,17.8113417465424,121.274618028809,0,35.6203359467978,32.229826004755,73.5105542796346,56.7498648055421,0,63.3346562606778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1730501818735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3928466831969,0,0,0,0,0,0,0,20.3414609916437,116.889452831778,0,0,0,0,0,0.92947049429925,0,0,0,0,13.4809204346827,0,0,0,0,5.29221619990316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.7228193862857,0,0,0,0,0,0,0,0,0,14.8443823818583,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,2.50962739701486,7.54112533337211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1593289814244,0,0,0,0,0,0,0,0,7.46306874841063,0.489961987071888,0,0,0,0,0,0,0,0,2.48578814858586,0,0,0,29.9193615584249,2.56508224804908,0,0,0.288180834308212,0,0,0,0,12.727477869307,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,3.35434687599266,0.394028536495991,0,0,0,0,0,0,0,3.80099721227599,89.8790350849319,11.7571449639387,0,0,52.8202867534807,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8518013820931,1.08803560673895,0,1.22538230705385,0,0,0,0,0,0,0.554645257684261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0,6.21051827505038,0,13.8237691570157,0,0.300515217994437,0,2.84809513243263,0,0,0,0,13.6009439985472,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.7411291724682,5.0880696104547,0,0,8.8168985922671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0,6.65352387976704,0,0,0,0,0,0,0,225.818677757753,0.127762427639595,0.535701835878287,0,0,0,6.29786828154736,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.6828739083758,12.4426739126537,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5713297917742,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,2.0793248022896,0.4226557275834,0,0,0,0.199882311849858,0,28.2315897372553,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,8.21359922604674,0,0,0,0,0,0,0,0,0.611207220914332,5.69654649642034,1.99727032255654,0,0 | ||
|short_description=p1@XG | |short_description=p1@XG | ||
}} | }} |
Latest revision as of 19:16, 24 September 2015
Short description: | p1@XG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XG_5end |
Coexpression cluster: | C2028_peripheral_Preadipocyte_Adipocyte_Gingival_Smooth_leiomyoma_Fibroblast |
Association with transcript: | 0bp_to_ENST00000381174, ENST00000419513, ENST00000426774, NM_001141919, NM_001141920, NM_175569, uc004cqp.2, uc010ndb.2, uc011mhg.1_5end |
EntrezGene: | XG |
HGNC: | 12806 |
UniProt: | P55808B4E289 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.30e-19 | 12 |
fibroblast of tunica adventitia of artery | 3.08e-10 | 4 |
fibroblast of the aortic adventitia | 3.08e-10 | 4 |
preadipocyte of the breast | 8.05e-09 | 3 |
fat cell | 8.56e-09 | 15 |
fibroblast | 8.42e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
breast | 8.33e-15 | 10 |
chest | 2.62e-13 | 11 |
artery wall | 3.08e-10 | 4 |
tunica adventitia of artery | 3.08e-10 | 4 |
adventitia | 3.08e-10 | 4 |
tunica adventitia of blood vessel | 3.08e-10 | 4 |
aorta tunica adventitia | 3.08e-10 | 4 |
aorta wall | 3.08e-10 | 4 |
hypodermis | 3.12e-08 | 5 |
embryonic uterus | 4.71e-08 | 22 |
internal female genitalia | 5.28e-08 | 22 |
integument | 5.45e-08 | 46 |
integumental system | 5.45e-08 | 46 |
surface structure | 2.72e-07 | 99 |
uterus | 6.33e-07 | 21 |
female reproductive organ | 6.77e-07 | 37 |
female reproductive system | 6.77e-07 | 37 |
internal genitalia | 8.29e-07 | 25 |
omentum | 9.13e-07 | 6 |
peritoneum | 9.13e-07 | 6 |
abdominal cavity | 9.13e-07 | 6 |
visceral peritoneum | 9.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.02e-07 | 3 |
cell type benign neoplasm | 1.47e-07 | 3 |
leiomyoma | 1.47e-07 | 3 |