FFCP PHASE1:Hg19::chr17:42148225..42148317,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42148225..42148317,+ to FFCP PHASE1:Hg19::chr17:42148225..42148317,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92579 | |EntrezGene=92579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24861 | |HGNC=24861 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002ifa.1_5end | |||
|cluster_id=chr17:42148225..42148317,+ | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_G6PC3_5end | |||
|id=chr17:42148225..42148317,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.24e-37!180;CL:0002321!5.89e-33!248;CL:0000220!1.35e-32!246;CL:0000222!2.87e-26!119;CL:0000548!3.58e-26!679;CL:0000004!3.58e-26!679;CL:0000255!3.58e-26!679;CL:0000012!1.07e-25!682;CL:0000144!7.42e-21!625;CL:0000183!1.55e-18!59;CL:0000680!1.04e-16!57;CL:0000056!1.04e-16!57;CL:0000355!1.04e-16!57;CL:0000393!1.20e-16!60;CL:0000211!1.20e-16!60;CL:0000187!7.11e-16!54;CL:0000192!2.77e-15!42;CL:0000514!2.77e-15!42;CL:0002371!3.19e-13!591;CL:0000066!3.34e-13!254;CL:0000359!6.57e-13!32;CL:0000003!9.75e-13!722;CL:0000133!2.51e-12!59;CL:0000221!4.50e-12!71;CL:0000333!1.10e-11!41;CL:0000213!1.42e-10!57;CL:0000215!1.42e-10!57;CL:0000057!4.83e-10!75;CL:0000147!1.10e-07!14;CL:0000115!4.11e-07!35;CL:0000325!5.65e-07!39;CL:0002078!8.46e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.53e-12;32!CL:0000192;9.28e-11;43!CL:0000187;1.90e-08;55!CL:0000393;2.74e-08;61!CL:0000211;2.74e-08;61!CL:0000147;1.09e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.00e-33,250;CL:0000222,2.69e-26,121;CL:0000680,2.98e-16,58;CL:0000056,2.98e-16,58;CL:0000355,2.98e-16,58;CL:0000393,3.31e-16,61;CL:0000211,3.31e-16,61;CL:0000187,2.04e-15,55;CL:0000192,9.55e-15,43;CL:0000514,9.55e-15,43;CL:0000066,2.45e-13,253;CL:0000359,6.57e-13,32;CL:0000133,2.51e-12,59;CL:0000221,4.82e-12,72;CL:0000333,1.10e-11,41;CL:0000213,6.44e-11,58;CL:0000215,6.44e-11,58;CL:0000057,7.07e-10,76;CL:0000147,1.10e-07,14;CL:0000115,1.89e-07,36;CL:0002078,4.10e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;9.28e-11;43!CL:0000355;1.24e-08;58!CL:0000222;2.31e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.85e-19!79;UBERON:0007798!9.85e-19!79;UBERON:0004290!8.71e-16!70;UBERON:0000914!2.33e-15!83;UBERON:0002329!2.33e-15!83;UBERON:0003077!2.33e-15!83;UBERON:0003059!2.33e-15!83;UBERON:0007282!2.33e-15!83;UBERON:0009618!2.33e-15!83;UBERON:0007285!2.33e-15!83;UBERON:0000055!2.94e-15!69;UBERON:0001637!4.66e-15!42;UBERON:0003509!4.66e-15!42;UBERON:0004572!4.66e-15!42;UBERON:0003914!7.84e-15!118;UBERON:0001981!1.28e-14!60;UBERON:0007500!1.28e-14!60;UBERON:0004537!1.28e-14!60;UBERON:0006965!1.28e-14!60;UBERON:0004872!2.91e-14!84;UBERON:0000490!3.66e-14!138;UBERON:0001134!4.19e-14!61;UBERON:0002036!4.19e-14!61;UBERON:0003082!4.19e-14!61;UBERON:0000486!4.62e-14!82;UBERON:0005256!6.83e-14!143;UBERON:0002100!1.22e-13!216;UBERON:0000119!5.74e-13!312;UBERON:0002385!8.61e-13!63;UBERON:0001015!8.61e-13!63;UBERON:0000383!8.61e-13!63;UBERON:0000483!4.29e-12!309;UBERON:0004573!1.44e-11!33;UBERON:0004571!1.44e-11!33;UBERON:0004535!1.75e-11!110;UBERON:0003104!1.85e-11!238;UBERON:0009142!1.85e-11!238;UBERON:0001009!1.31e-10!113;UBERON:0000475!6.81e-10!365;UBERON:0000481!8.47e-09!347;UBERON:0000477!4.12e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.35e-11;42!UBERON:0003509;4.35e-11;42!UBERON:0004572;4.35e-11;42!UBERON:0004573;1.18e-10;33!UBERON:0004571;1.18e-10;33!UBERON:0007500;5.94e-10;56!UBERON:0001981;5.94e-10;56!UBERON:0004537;5.94e-10;56!UBERON:0003914;1.98e-09;74!UBERON:0000055;8.46e-09;65!UBERON:0002049;1.03e-08;75!UBERON:0007798;1.03e-08;75!UBERON:0000490;4.61e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.07e-19,78;UBERON:0007798,5.07e-19,78;UBERON:0007503,5.00e-18,78;UBERON:0000490,1.17e-15,148;UBERON:0000055,1.58e-15,68;UBERON:0002329,2.06e-15,71;UBERON:0003059,2.06e-15,71;UBERON:0007282,2.06e-15,71;UBERON:0004290,2.06e-15,71;UBERON:0009618,2.06e-15,71;UBERON:0003914,4.44e-15,117;UBERON:0001637,4.66e-15,42;UBERON:0003509,4.66e-15,42;UBERON:0004572,4.66e-15,42;UBERON:0007524,4.79e-15,73;UBERON:0003077,5.76e-15,72;UBERON:0007285,5.76e-15,72;UBERON:0003104,6.40e-15,160;UBERON:0009142,6.40e-15,160;UBERON:0007500,6.50e-15,59;UBERON:0001981,6.50e-15,59;UBERON:0004537,6.50e-15,59;UBERON:0006965,6.50e-15,59;UBERON:0004872,1.79e-14,83;UBERON:0000486,9.28e-14,83;UBERON:0001134,1.00e-13,62;UBERON:0002036,1.00e-13,62;UBERON:0003082,1.00e-13,62;UBERON:0002100,1.73e-13,199;UBERON:0000119,2.69e-13,309;UBERON:0002385,1.88e-12,64;UBERON:0001015,1.88e-12,64;UBERON:0000383,1.88e-12,64;UBERON:0000483,2.07e-12,306;UBERON:0005256,3.20e-12,122;UBERON:0004535,1.28e-11,109;UBERON:0004573,1.44e-11,33;UBERON:0004571,1.44e-11,33;UBERON:0001009,9.81e-11,112 | |||
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| ||
|short_description=p1@G6PC3 | |||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p1@G6PC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_G6PC3_5end |
Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_uc002ifa.1_5end |
EntrezGene: | G6PC3 |
HGNC: | 24861 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.00e-33 | 250 |
mesodermal cell | 2.69e-26 | 121 |
muscle precursor cell | 2.98e-16 | 58 |
myoblast | 2.98e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.98e-16 | 58 |
electrically responsive cell | 3.31e-16 | 61 |
electrically active cell | 3.31e-16 | 61 |
muscle cell | 2.04e-15 | 55 |
smooth muscle cell | 9.55e-15 | 43 |
smooth muscle myoblast | 9.55e-15 | 43 |
epithelial cell | 2.45e-13 | 253 |
vascular associated smooth muscle cell | 6.57e-13 | 32 |
neurectodermal cell | 2.51e-12 | 59 |
ectodermal cell | 4.82e-12 | 72 |
migratory neural crest cell | 1.10e-11 | 41 |
lining cell | 6.44e-11 | 58 |
barrier cell | 6.44e-11 | 58 |
fibroblast | 7.07e-10 | 76 |
pigment cell | 1.10e-07 | 14 |
endothelial cell | 1.89e-07 | 36 |
meso-epithelial cell | 4.10e-07 | 45 |