FFCP PHASE1:Hg19::chr5:136315149..136315160,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:136315149..136315160,-
|short_description=p10@SPOCK1
|description=CAGE_peak_10_at_SPOCK1_5end
|association_with_transcript=28bp_to_ENST00000515091_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6695 | |EntrezGene=6695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11251 | |HGNC=11251 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000515091_5end | |||
|cluster_id=chr5:136315149..136315160,- | |||
|description=CAGE_peak_10_at_SPOCK1_5end | |||
|id=chr5:136315149..136315160,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.66e-15;1!CL:0002581;1.66e-15;1!CL:0000501;1.66e-15;1!CL:1000306;3.94e-15;4!CL:0002547;3.94e-15;4!CL:0002334;3.07e-11;12!CL:0002593;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,9.99e-16,1;CL:0002174,1.34e-15,1;CL:0000501,1.34e-15,1;CL:1000306,3.94e-15,4;CL:0002547,3.94e-15,4;CL:0002334,2.45e-11,12;CL:0002593,2.87e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.90e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.66e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.16e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.97e-16!57;UBERON:0005068!8.97e-16!57;UBERON:0006241!8.97e-16!57;UBERON:0007135!8.97e-16!57;UBERON:0001893!2.62e-14!34;UBERON:0000956!2.84e-14!25;UBERON:0000203!2.84e-14!25;UBERON:0002020!2.86e-14!34;UBERON:0003528!2.86e-14!34;UBERON:0002780!4.28e-14!41;UBERON:0001890!4.28e-14!41;UBERON:0006240!4.28e-14!41;UBERON:0003075!6.94e-14!86;UBERON:0007284!6.94e-14!86;UBERON:0002619!8.02e-14!22;UBERON:0002616!1.18e-13!59;UBERON:0002791!1.28e-13!33;UBERON:0003080!1.42e-13!42;UBERON:0003056!3.65e-13!61;UBERON:0002346!1.01e-12!90;UBERON:0001869!1.35e-12!32;UBERON:0001950!6.68e-12!20;UBERON:0000955!5.90e-11!69;UBERON:0006238!5.90e-11!69;UBERON:0005743!1.24e-10!86;UBERON:0000025!3.14e-10!194;UBERON:0001017!5.00e-10!82;UBERON:0000073!2.37e-09!94;UBERON:0001016!2.37e-09!94;UBERON:0000483!2.45e-09!309;UBERON:0000119!4.91e-09!312;UBERON:0004111!1.64e-08!241;UBERON:0000200!2.38e-08!6;UBERON:0000475!7.87e-08!365;UBERON:0000477!1.88e-07!286;UBERON:0000033!2.57e-07!123;UBERON:0000153!5.56e-07!129;UBERON:0007811!5.56e-07!129;UBERON:0001637!9.23e-07!42;UBERON:0003509!9.23e-07!42;UBERON:0004572!9.23e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.94e-15;4!UBERON:0000415;3.94e-15;4!UBERON:0007240;3.94e-15;4!UBERON:0005742;3.94e-15;4!UBERON:0005734;3.94e-15;4!UBERON:0004664;3.94e-15;4!UBERON:0004663;3.94e-15;4!UBERON:0002771;2.07e-08;2!UBERON:0005406;2.07e-08;2!UBERON:0002456;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.94e-15,4;UBERON:0007240,3.94e-15,4;UBERON:0005742,3.94e-15,4;UBERON:0005734,3.94e-15,4;UBERON:0004664,3.94e-15,4;UBERON:0004663,3.94e-15,4;UBERON:0004797,4.76e-09,7;UBERON:0002771,1.39e-08,2;UBERON:0005406,1.61e-08,2;UBERON:0002456,2.87e-08,2;UBERON:0004573,3.75e-07,33;UBERON:0004571,3.75e-07,33 | |||
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| ||
|short_description=p10@SPOCK1 | |||
}} | }} |
Latest revision as of 20:22, 24 September 2015
Short description: | p10@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPOCK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000515091_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 9.99e-16 | 1 |
follicular cell of ovary | 1.34e-15 | 1 |
granulosa cell | 1.34e-15 | 1 |
fibroblast of tunica adventitia of artery | 3.94e-15 | 4 |
fibroblast of the aortic adventitia | 3.94e-15 | 4 |
preadipocyte | 2.45e-11 | 12 |
smooth muscle cell of the internal thoracic artery | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.94e-15 | 4 |
tunica adventitia of artery | 3.94e-15 | 4 |
adventitia | 3.94e-15 | 4 |
tunica adventitia of blood vessel | 3.94e-15 | 4 |
aorta tunica adventitia | 3.94e-15 | 4 |
aorta wall | 3.94e-15 | 4 |
blood vessel layer | 4.76e-09 | 7 |
middle temporal gyrus | 1.39e-08 | 2 |
perirenal fat | 1.61e-08 | 2 |
internal thoracic artery | 2.87e-08 | 2 |
systemic artery | 3.75e-07 | 33 |
systemic arterial system | 3.75e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.16e-15 | 1 |