FFCP PHASE1:Hg19::chr2:220284844..220284855,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1674 | |EntrezGene=1674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2770 | |HGNC=2770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492726_5end | |association_with_transcript=0bp_to_ENST00000492726_5end | ||
|cluster_id=chr2:220284844..220284855,+ | |||
|coexpression_cluster_id=C2086 | |coexpression_cluster_id=C2086 | ||
|description=CAGE_peak_8_at_DES_5end | |description=CAGE_peak_8_at_DES_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.72e-13;65!UBERON:0005062;2.30e-10;4!UBERON:0007284;2.30e-10;4!UBERON:0007297;4.02e-10;2!UBERON:0003104;6.54e-08;31 | |ontology_enrichment_development_v019=UBERON:0006603;1.72e-13;65!UBERON:0005062;2.30e-10;4!UBERON:0007284;2.30e-10;4!UBERON:0007297;4.02e-10;2!UBERON:0003104;6.54e-08;31 | ||
|ontology_enrichment_disease=DOID:1036!3.40e-07!8 | |ontology_enrichment_disease=DOID:1036!3.40e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;5.81e-14;8!DOID:114;5.54e-10;2!DOID:0060084;6.35e-07;3!DOID:127;6.35e-07;3 | |ontology_enrichment_disease_v019=DOID:1036;5.81e-14;8!DOID:114;5.54e-10;2!DOID:0060084;6.35e-07;3!DOID:127;6.35e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,6.88e-14,8;DOID:114,4.23e-10,2;DOID:0060084,5.48e-07,3;DOID:127,5.48e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-21!115;UBERON:0003135!1.02e-11!11;UBERON:0004151!5.04e-08!3;UBERON:0003133!1.14e-07!48;UBERON:0006947!1.41e-07!3;UBERON:0004054!1.41e-07!3;UBERON:0003978!1.54e-07!3;UBERON:0009751!1.54e-07!3;UBERON:0000946!1.54e-07!3;UBERON:0002523!1.54e-07!3;UBERON:0005983!1.54e-07!3;UBERON:0002165!1.54e-07!3;UBERON:0002062!1.54e-07!3;UBERON:0007280!1.54e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.88e-21!115;UBERON:0003135!1.02e-11!11;UBERON:0004151!5.04e-08!3;UBERON:0003133!1.14e-07!48;UBERON:0006947!1.41e-07!3;UBERON:0004054!1.41e-07!3;UBERON:0003978!1.54e-07!3;UBERON:0009751!1.54e-07!3;UBERON:0000946!1.54e-07!3;UBERON:0002523!1.54e-07!3;UBERON:0005983!1.54e-07!3;UBERON:0002165!1.54e-07!3;UBERON:0002062!1.54e-07!3;UBERON:0007280!1.54e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.22e-14;3!UBERON:0003978;1.19e-13;3!UBERON:0000946;1.19e-13;3!UBERON:0007100;2.72e-13;25!UBERON:0002081;3.27e-10;2!UBERON:0002133;1.14e-09;2!UBERON:0004175;1.77e-09;21!UBERON:0006947;5.15e-07;3!UBERON:0004054;5.15e-07;3!UBERON:0001723;6.35e-07;3!UBERON:0001033;6.35e-07;3!UBERON:0000948;6.61e-07;22!UBERON:0003135;8.85e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0004151;1.22e-14;3!UBERON:0003978;1.19e-13;3!UBERON:0000946;1.19e-13;3!UBERON:0007100;2.72e-13;25!UBERON:0002081;3.27e-10;2!UBERON:0002133;1.14e-09;2!UBERON:0004175;1.77e-09;21!UBERON:0006947;5.15e-07;3!UBERON:0004054;5.15e-07;3!UBERON:0001723;6.35e-07;3!UBERON:0001033;6.35e-07;3!UBERON:0000948;6.61e-07;22!UBERON:0003135;8.85e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.87e-17,114;UBERON:0004151,1.25e-14,3;UBERON:0003978,1.19e-13,3;UBERON:0009751,1.19e-13,3;UBERON:0000946,1.19e-13,3;UBERON:0002523,1.19e-13,3;UBERON:0005983,1.19e-13,3;UBERON:0002165,1.19e-13,3;UBERON:0002062,1.19e-13,3;UBERON:0007280,1.19e-13,3;UBERON:0007100,3.17e-12,27;UBERON:0002081,3.52e-10,2;UBERON:0010227,3.52e-10,2;UBERON:0003103,4.53e-10,68;UBERON:0002133,7.97e-10,2;UBERON:0004175,8.20e-08,25;UBERON:0006947,5.31e-07,3;UBERON:0004054,5.31e-07,3;UBERON:0003135,7.83e-07,11;UBERON:0001723,9.08e-07,3;UBERON:0001033,9.08e-07,3;UBERON:0010056,9.08e-07,3 | |||
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| ||
|short_description=p8@DES | |short_description=p8@DES | ||
}} | }} |
Latest revision as of 20:41, 24 September 2015
Short description: | p8@DES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DES_5end |
Coexpression cluster: | C2086_smooth_bladder_heart_gall_esophagus_seminal_uterus |
Association with transcript: | 0bp_to_ENST00000492726_5end |
EntrezGene: | DES |
HGNC: | 2770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.87e-17 | 114 |
cardiac chamber | 1.25e-14 | 3 |
valve | 1.19e-13 | 3 |
cardiac mesenchyme | 1.19e-13 | 3 |
cardial valve | 1.19e-13 | 3 |
tunica intima | 1.19e-13 | 3 |
heart layer | 1.19e-13 | 3 |
endocardium | 1.19e-13 | 3 |
endocardial cushion | 1.19e-13 | 3 |
presumptive endocardium | 1.19e-13 | 3 |
primary circulatory organ | 3.17e-12 | 27 |
cardiac atrium | 3.52e-10 | 2 |
future cardiac atrium | 3.52e-10 | 2 |
compound organ | 4.53e-10 | 68 |
atrioventricular valve | 7.97e-10 | 2 |
internal genitalia | 8.20e-08 | 25 |
male genital duct | 5.31e-07 | 3 |
internal male genitalia | 5.31e-07 | 3 |
male reproductive organ | 7.83e-07 | 11 |
tongue | 9.08e-07 | 3 |
gustatory system | 9.08e-07 | 3 |
future tongue | 9.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.88e-14 | 8 |
heart disease | 4.23e-10 | 2 |
cell type benign neoplasm | 5.48e-07 | 3 |
leiomyoma | 5.48e-07 | 3 |