FFCP PHASE1:Hg19::chr5:137071871..137071876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26249 | |EntrezGene=26249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6354 | |HGNC=6354 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UH77,Q8N4I8 | |UniProt=Q9UH77,Q8N4I8 | ||
|association_with_transcript=-92bp_to_ENST00000309755,NM_017415,uc010jek.2,uc010jem.1_5end | |association_with_transcript=-92bp_to_ENST00000309755,NM_017415,uc010jek.2,uc010jem.1_5end | ||
|cluster_id=chr5:137071871..137071876,- | |||
|description=CAGE_peak_13_at_KLHL3_5end | |description=CAGE_peak_13_at_KLHL3_5end | ||
|id=chr5:137071871..137071876,- | |id=chr5:137071871..137071876,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;5.04e-34;2!CL:1000398;5.04e-34;2!CL:0002567;3.27e-23;3!CL:0000148;6.13e-08;10!CL:0000182;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.05e-34,2;CL:1000398,7.05e-34,2;CL:0002567,2.62e-23,3;CL:0000148,5.73e-08,10;CL:0000541,5.73e-08,10;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.45e-27!115;UBERON:0001049!3.91e-25!57;UBERON:0005068!3.91e-25!57;UBERON:0006241!3.91e-25!57;UBERON:0007135!3.91e-25!57;UBERON:0002616!4.26e-24!59;UBERON:0003075!2.29e-23!86;UBERON:0007284!2.29e-23!86;UBERON:0002346!5.04e-22!90;UBERON:0002619!1.19e-21!22;UBERON:0001950!2.46e-20!20;UBERON:0000955!1.91e-19!69;UBERON:0006238!1.91e-19!69;UBERON:0001869!2.70e-19!32;UBERON:0005743!2.79e-19!86;UBERON:0002780!4.21e-19!41;UBERON:0001890!4.21e-19!41;UBERON:0006240!4.21e-19!41;UBERON:0000956!8.31e-19!25;UBERON:0000203!8.31e-19!25;UBERON:0001017!8.42e-19!82;UBERON:0003080!1.47e-18!42;UBERON:0001893!5.49e-18!34;UBERON:0002020!7.18e-18!34;UBERON:0003528!7.18e-18!34;UBERON:0000073!6.98e-17!94;UBERON:0001016!6.98e-17!94;UBERON:0003056!9.17e-17!61;UBERON:0002791!5.61e-16!33;UBERON:0000200!8.91e-14!6;UBERON:0000033!7.06e-13!123;UBERON:0000153!5.47e-12!129;UBERON:0007811!5.47e-12!129;UBERON:0002771!1.30e-10!3;UBERON:0001871!1.47e-10!7;UBERON:0004121!3.32e-10!169;UBERON:0004733!7.12e-10!12;UBERON:0002028!7.12e-10!12;UBERON:0007277!7.12e-10!12;UBERON:0000924!8.18e-10!173;UBERON:0006601!8.18e-10!173;UBERON:0004732!4.63e-09!13;UBERON:0003076!9.28e-08!15;UBERON:0003057!9.28e-08!15;UBERON:0000025!1.42e-07!194;UBERON:0002360!1.59e-07!2;UBERON:0000094!1.59e-07!2;UBERON:0007645!1.59e-07!2;UBERON:0000064!3.13e-07!219;UBERON:0002298!6.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.04e-34;2!UBERON:0003497;5.04e-34;2!UBERON:0003909;5.04e-34;2!UBERON:0003835;5.04e-34;2!UBERON:0001280;3.27e-23;3!UBERON:0004647;3.27e-23;3!UBERON:0002037;2.45e-12;6!UBERON:0003513;8.99e-11;7!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,7.05e-34,2;UBERON:0003497,7.05e-34,2;UBERON:0003909,7.05e-34,2;UBERON:0003835,7.05e-34,2;UBERON:0001280,4.09e-23,3;UBERON:0004647,4.09e-23,3;UBERON:0005171,4.09e-23,3;UBERON:0002037,2.45e-12,6;UBERON:0006215,2.45e-12,6;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0003513,9.89e-11,7;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
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| ||
|short_description=p13@KLHL3 | |short_description=p13@KLHL3 | ||
}} | }} |
Latest revision as of 21:03, 24 September 2015
Short description: | p13@KLHL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KLHL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -92bp_to_ENST00000309755, NM_017415, uc010jek.2, uc010jem.1_5end |
EntrezGene: | KLHL3 |
HGNC: | 6354 |
UniProt: | Q9UH77Q8N4I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 7.05e-34 | 2 |
endothelial cell of hepatic sinusoid | 7.05e-34 | 2 |
light melanocyte | 2.62e-23 | 3 |
melanocyte | 5.73e-08 | 10 |
melanoblast | 5.73e-08 | 10 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 7.05e-34 | 2 |
abdomen blood vessel | 7.05e-34 | 2 |
sinusoid | 7.05e-34 | 2 |
abdominal segment blood vessel | 7.05e-34 | 2 |
liver parenchyma | 4.09e-23 | 3 |
liver lobule | 4.09e-23 | 3 |
hepatic duct | 4.09e-23 | 3 |
cerebellum | 2.45e-12 | 6 |
rhombic lip | 2.45e-12 | 6 |
bile duct | 2.74e-12 | 6 |
digestive system duct | 2.74e-12 | 6 |
trunk blood vessel | 9.89e-11 | 7 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |