FFCP PHASE1:Hg19::chrX:32173579..32173593,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2928 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7EQR9,F8VX32,E7EQS5,E7ESB2,F5GZY3,A1L0U9,P11532,Q8N754,A7E212,Q59HC3 | ||
|association_with_transcript=0bp_to_ENST00000343523,ENST00000359836,ENST00000378707,ENST00000474231,ENST00000541735,NM_004013,NM_004020,NM_004021,NM_004022,NM_004023,uc004dcr.1,uc004dcs.1,uc004dct.1,uc004dcu.1,uc004dcv.1_5end | |association_with_transcript=0bp_to_ENST00000343523,ENST00000359836,ENST00000378707,ENST00000474231,ENST00000541735,NM_004013,NM_004020,NM_004021,NM_004022,NM_004023,uc004dcr.1,uc004dcs.1,uc004dct.1,uc004dcu.1,uc004dcv.1_5end | ||
|cluster_id=chrX:32173579..32173593,- | |cluster_id=chrX:32173579..32173593,- | ||
Latest revision as of 21:08, 24 September 2015
| Short description: | p5@DMD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_DMD_5end |
| Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
| Association with transcript: | 0bp_to_ENST00000343523, ENST00000359836, ENST00000378707, ENST00000474231, ENST00000541735, NM_004013, NM_004020, NM_004021, NM_004022, NM_004023, uc004dcr.1, uc004dcs.1, uc004dct.1, uc004dcu.1, uc004dcv.1_5end |
| EntrezGene: | DMD |
| HGNC: | 2928 |
| UniProt: | E7EQR9F8VX32E7EQS5E7ESB2F5GZY3A1L0U9P11532Q8N754A7E212Q59HC3 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@DMD |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.29e-118 | 56 |
| neural rod | 1.29e-118 | 56 |
| future spinal cord | 1.29e-118 | 56 |
| neural keel | 1.29e-118 | 56 |
| regional part of nervous system | 2.59e-111 | 53 |
| regional part of brain | 2.59e-111 | 53 |
| central nervous system | 8.79e-110 | 81 |
| nervous system | 2.72e-104 | 89 |
| regional part of forebrain | 3.48e-96 | 41 |
| forebrain | 3.48e-96 | 41 |
Showing 1 to 10 of 90 entries
