FFCP PHASE1:Hg19::chr11:85522175..85522192,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:85522175..85522192,-
|short_description=p1@SYTL2
|description=CAGE_peak_1_at_SYTL2_5end
|association_with_transcript=0bp_to_ENST00000389960,ENST0000052483...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54843 | |EntrezGene=54843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15585 | |HGNC=15585 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCH5 | |UniProt=Q9HCH5 | ||
|association_with_transcript=0bp_to_ENST00000389960,ENST00000524830,ENST00000527523,NM_032943,uc010rti.1,uc010rtj.1_5end | |||
|cluster_id=chr11:85522175..85522192,- | |||
|description=CAGE_peak_1_at_SYTL2_5end | |||
|id=chr11:85522175..85522192,- | |||
|ontology_enrichment_celltype=CL:0000791!9.37e-09!18;CL:0000789!9.37e-09!18;CL:0002420!9.37e-09!18;CL:0002419!9.37e-09!18;CL:0000790!9.37e-09!18;CL:0000625!1.14e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.48e-09;18!CL:0000789;7.48e-09;18!CL:0002419;7.48e-09;18!CL:0000625;3.58e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.66e-09,18;CL:0000789,7.66e-09,18;CL:0002420,7.66e-09,18;CL:0002419,7.66e-09,18;CL:0000790,7.66e-09,18;CL:0000625,3.84e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.48e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-29!115;UBERON:0001049!2.23e-11!57;UBERON:0005068!2.23e-11!57;UBERON:0006241!2.23e-11!57;UBERON:0007135!2.23e-11!57;UBERON:0003080!3.12e-09!42;UBERON:0002616!3.96e-09!59;UBERON:0002780!8.53e-09!41;UBERON:0001890!8.53e-09!41;UBERON:0006240!8.53e-09!41;UBERON:0000955!1.42e-08!69;UBERON:0006238!1.42e-08!69;UBERON:0001017!6.56e-08!82;UBERON:0001893!6.72e-08!34;UBERON:0002020!1.10e-07!34;UBERON:0003528!1.10e-07!34;UBERON:0002791!1.32e-07!33;UBERON:0001869!2.51e-07!32;UBERON:0005743!5.16e-07!86;UBERON:0001046!6.04e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.17e-08;114!UBERON:0000160;8.95e-08;17!UBERON:0005409;2.31e-07;22!UBERON:0001893;2.71e-07;34!UBERON:0003528;4.73e-07;34!UBERON:0002020;4.73e-07;34!UBERON:0001869;4.75e-07;32!UBERON:0002791;5.64e-07;32!UBERON:0002780;7.22e-07;41!UBERON:0001890;7.22e-07;41!UBERON:0002619;7.70e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.18e-30,114;UBERON:0001049,1.70e-11,56;UBERON:0005068,1.70e-11,56;UBERON:0006241,1.70e-11,56;UBERON:0007135,1.70e-11,56;UBERON:0000073,1.44e-10,53;UBERON:0002616,1.44e-10,53;UBERON:0011216,3.05e-10,223;UBERON:0002780,3.49e-09,41;UBERON:0001890,3.49e-09,41;UBERON:0003080,3.49e-09,41;UBERON:0006240,3.49e-09,41;UBERON:0000955,1.02e-08,68;UBERON:0006238,1.02e-08,68;UBERON:0001893,3.25e-08,34;UBERON:0003528,5.50e-08,34;UBERON:0002020,5.50e-08,34;UBERON:0000160,1.02e-07,17;UBERON:0001017,1.02e-07,81;UBERON:0001869,1.33e-07,32;UBERON:0002791,1.43e-07,32;UBERON:0001046,2.31e-07,19;UBERON:0005409,4.47e-07,25;UBERON:0002619,7.93e-07,22 | |||
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| ||
|short_description=p1@SYTL2 | |||
}} | }} |
Latest revision as of 21:23, 24 September 2015
Short description: | p1@SYTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389960, ENST00000524830, ENST00000527523, NM_032943, uc010rti.1, uc010rtj.1_5end |
EntrezGene: | SYTL2 |
HGNC: | 15585 |
UniProt: | Q9HCH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.66e-09 | 18 |
alpha-beta T cell | 7.66e-09 | 18 |
immature T cell | 7.66e-09 | 18 |
mature T cell | 7.66e-09 | 18 |
immature alpha-beta T cell | 7.66e-09 | 18 |
CD8-positive, alpha-beta T cell | 3.84e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.18e-30 | 114 |
neural tube | 1.70e-11 | 56 |
neural rod | 1.70e-11 | 56 |
future spinal cord | 1.70e-11 | 56 |
neural keel | 1.70e-11 | 56 |
regional part of nervous system | 1.44e-10 | 53 |
regional part of brain | 1.44e-10 | 53 |
organ system subdivision | 3.05e-10 | 223 |
regional part of forebrain | 3.49e-09 | 41 |
forebrain | 3.49e-09 | 41 |
anterior neural tube | 3.49e-09 | 41 |
future forebrain | 3.49e-09 | 41 |
brain | 1.02e-08 | 68 |
future brain | 1.02e-08 | 68 |
telencephalon | 3.25e-08 | 34 |
brain grey matter | 5.50e-08 | 34 |
gray matter | 5.50e-08 | 34 |
intestine | 1.02e-07 | 17 |
central nervous system | 1.02e-07 | 81 |
cerebral hemisphere | 1.33e-07 | 32 |
regional part of telencephalon | 1.43e-07 | 32 |
hindgut | 2.31e-07 | 19 |
gastrointestinal system | 4.47e-07 | 25 |
regional part of cerebral cortex | 7.93e-07 | 22 |