FFCP PHASE1:Hg19::chr11:85956225..85956289,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:85956225..85956289,+ to FFCP PHASE1:Hg19::chr11:85956225..85956289,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8726 | |EntrezGene=8726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3188 | |HGNC=3188 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY72 | |UniProt=F5GY72 | ||
|association_with_transcript=0bp_to_ENST00000534595,ENST00000537092_5end | |||
|cluster_id=chr11:85956225..85956289,+ | |||
|description=CAGE_peak_2_at_EED_5end | |||
|id=chr11:85956225..85956289,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.85e-28!53;CL:0000051!6.85e-28!53;CL:0000838!2.76e-27!52;CL:0000945!9.54e-14!24;CL:0000826!9.54e-14!24;CL:0000084!5.99e-13!25;CL:0000827!5.99e-13!25;CL:0000037!2.59e-12!172;CL:0000566!2.59e-12!172;CL:0000791!8.79e-12!18;CL:0000789!8.79e-12!18;CL:0002420!8.79e-12!18;CL:0002419!8.79e-12!18;CL:0000790!8.79e-12!18;CL:0002032!2.14e-11!165;CL:0000837!2.14e-11!165;CL:0000738!3.78e-11!140;CL:0000988!1.76e-10!182;CL:0000236!1.64e-09!14;CL:0002087!4.24e-09!119;CL:0002031!8.78e-09!124;CL:0000625!5.26e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.61e-16;53!CL:0000945;1.17e-13;24!CL:0000084;2.06e-13;25!CL:0000791;6.10e-12;18!CL:0000789;6.10e-12;18!CL:0002419;6.10e-12;18!CL:0000236;4.88e-09;13!CL:0000625;4.22e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.45e-28,53;CL:0000051,6.45e-28,53;CL:0000838,2.61e-27,52;CL:0000945,9.27e-14,24;CL:0000826,9.27e-14,24;CL:0000084,5.83e-13,25;CL:0000827,5.83e-13,25;CL:0000791,8.58e-12,18;CL:0000789,8.58e-12,18;CL:0002420,8.58e-12,18;CL:0002419,8.58e-12,18;CL:0000790,8.58e-12,18;CL:0000037,1.02e-11,168;CL:0002032,8.15e-11,161;CL:0000837,8.15e-11,161;CL:0000738,1.46e-10,136;CL:0000988,2.69e-10,177;CL:0000236,1.61e-09,14;CL:0002087,1.64e-08,115;CL:0002031,3.31e-08,120;CL:0000625,5.18e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.61e-16;53!CL:0000790;6.10e-12;18 | |||
|ontology_enrichment_disease=DOID:162!1.16e-09!235;DOID:14566!5.40e-09!239;DOID:2531!9.39e-07!51;DOID:0060083!9.39e-07!51;DOID:0050687!9.69e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.19e-09,235;DOID:14566,5.52e-09,239;DOID:2531,8.89e-07,51;DOID:0060083,8.89e-07,51;DOID:0050687,9.16e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.39e-07,114 | |||
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| ||
|short_description=p2@EED | |||
}} | }} |
Latest revision as of 21:52, 24 September 2015
Short description: | p2@EED |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EED_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534595, ENST00000537092_5end |
EntrezGene: | EED |
HGNC: | 3188 |
UniProt: | F5GY72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.45e-28 | 53 |
common lymphoid progenitor | 6.45e-28 | 53 |
lymphoid lineage restricted progenitor cell | 2.61e-27 | 52 |
lymphocyte of B lineage | 9.27e-14 | 24 |
pro-B cell | 9.27e-14 | 24 |
T cell | 5.83e-13 | 25 |
pro-T cell | 5.83e-13 | 25 |
mature alpha-beta T cell | 8.58e-12 | 18 |
alpha-beta T cell | 8.58e-12 | 18 |
immature T cell | 8.58e-12 | 18 |
mature T cell | 8.58e-12 | 18 |
immature alpha-beta T cell | 8.58e-12 | 18 |
hematopoietic stem cell | 1.02e-11 | 168 |
hematopoietic oligopotent progenitor cell | 8.15e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.15e-11 | 161 |
leukocyte | 1.46e-10 | 136 |
hematopoietic cell | 2.69e-10 | 177 |
B cell | 1.61e-09 | 14 |
nongranular leukocyte | 1.64e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.31e-08 | 120 |
CD8-positive, alpha-beta T cell | 5.18e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.39e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.19e-09 | 235 |
disease of cellular proliferation | 5.52e-09 | 239 |
hematologic cancer | 8.89e-07 | 51 |
immune system cancer | 8.89e-07 | 51 |
cell type cancer | 9.16e-07 | 143 |