FFCP PHASE1:Hg19::chr7:105332559..105332579,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222255 | |EntrezGene=222255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22210 | |HGNC=22210 | ||
|TSSclassifier=strong | |||
|UniProt=C9K0V9 | |UniProt=C9K0V9 | ||
|association_with_transcript=-475bp_to_ENST00000472195_5end | |association_with_transcript=-475bp_to_ENST00000472195_5end | ||
|cluster_id=chr7:105332559..105332579,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_ATXN7L1_5end | |description=CAGE_peak_8_at_ATXN7L1_5end | ||
|id=chr7:105332559..105332579,- | |id=chr7:105332559..105332579,- | ||
|ontology_enrichment_celltype=CL:0000738!9.46e-32!140;CL:0000542!1.43e-28!53;CL:0000051!1.43e-28!53;CL:0002087!2.17e-28!119;CL:0000838!8.99e-28!52;CL:0002031!2.96e-26!124;CL:0000037!2.19e-22!172;CL:0000566!2.19e-22!172;CL:0000791!2.49e-21!18;CL:0000789!2.49e-21!18;CL:0002420!2.49e-21!18;CL:0002419!2.49e-21!18;CL:0000790!2.49e-21!18;CL:0000988!4.72e-21!182;CL:0002032!1.32e-20!165;CL:0000837!1.32e-20!165;CL:0000084!3.56e-18!25;CL:0000827!3.56e-18!25;CL:0000236!1.30e-14!14;CL:0000625!1.65e-13!11;CL:0000945!9.16e-09!24;CL:0000826!9.16e-09!24;CL:0000624!3.27e-08!6;CL:0000766!6.64e-07!76 | |ontology_enrichment_celltype=CL:0000738!9.46e-32!140;CL:0000542!1.43e-28!53;CL:0000051!1.43e-28!53;CL:0002087!2.17e-28!119;CL:0000838!8.99e-28!52;CL:0002031!2.96e-26!124;CL:0000037!2.19e-22!172;CL:0000566!2.19e-22!172;CL:0000791!2.49e-21!18;CL:0000789!2.49e-21!18;CL:0002420!2.49e-21!18;CL:0002419!2.49e-21!18;CL:0000790!2.49e-21!18;CL:0000988!4.72e-21!182;CL:0002032!1.32e-20!165;CL:0000837!1.32e-20!165;CL:0000084!3.56e-18!25;CL:0000827!3.56e-18!25;CL:0000236!1.30e-14!14;CL:0000625!1.65e-13!11;CL:0000945!9.16e-09!24;CL:0000826!9.16e-09!24;CL:0000624!3.27e-08!6;CL:0000766!6.64e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.46e-44;18!CL:0000789;2.46e-44;18!CL:0002419;2.46e-44;18!CL:0000084;1.82e-30;25!CL:0000625;1.88e-27;11!CL:0000542;1.72e-25;53!CL:0000236;2.51e-21;13!CL:0000624;8.42e-16;6!CL:0000945;2.00e-10;24!CL:0002087;1.13e-09;104!CL:0000226;1.34e-08;3!CL:0000898;1.34e-08;3!CL:0000842;1.34e-08;3!CL:0000623;1.74e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.18e-45,18;CL:0000789,9.18e-45,18;CL:0002420,9.18e-45,18;CL:0002419,9.18e-45,18;CL:0000790,9.18e-45,18;CL:0000838,3.66e-43,52;CL:0000542,3.58e-42,53;CL:0000051,3.58e-42,53;CL:0000084,9.14e-31,25;CL:0000827,9.14e-31,25;CL:0000738,4.11e-29,136;CL:0000625,1.32e-27,11;CL:0002087,1.94e-26,115;CL:0002031,6.25e-25,120;CL:0000037,3.00e-21,168;CL:0000988,1.47e-19,177;CL:0000236,1.89e-19,14;CL:0002032,6.60e-18,161;CL:0000837,6.60e-18,161;CL:0000624,4.76e-16,6;CL:0000945,2.48e-10,24;CL:0000826,2.48e-10,24;CL:0000898,9.33e-09,3;CL:0000226,1.66e-08,3;CL:0000842,1.66e-08,3;CL:0000623,2.63e-08,3;CL:0000825,2.63e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.46e-44;18!CL:0000051;1.72e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-13!102;UBERON:0003061!1.73e-13!102;UBERON:0002193!1.80e-12!112;UBERON:0000178!4.78e-11!15;UBERON:0000179!4.78e-11!15;UBERON:0000463!4.78e-11!15;UBERON:0007023!1.14e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-12;15!UBERON:0000179;1.17e-12;15!UBERON:0000463;1.17e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.12e-12,15;UBERON:0000179,1.12e-12,15;UBERON:0000463,1.12e-12,15 | |||
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| ||
|short_description=p8@ATXN7L1 | |short_description=p8@ATXN7L1 | ||
}} | }} |
Latest revision as of 21:52, 24 September 2015
Short description: | p8@ATXN7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ATXN7L1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -475bp_to_ENST00000472195_5end |
EntrezGene: | ATXN7L1 |
HGNC: | 22210 |
UniProt: | C9K0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.18e-45 | 18 |
alpha-beta T cell | 9.18e-45 | 18 |
immature T cell | 9.18e-45 | 18 |
mature T cell | 9.18e-45 | 18 |
immature alpha-beta T cell | 9.18e-45 | 18 |
lymphoid lineage restricted progenitor cell | 3.66e-43 | 52 |
lymphocyte | 3.58e-42 | 53 |
common lymphoid progenitor | 3.58e-42 | 53 |
T cell | 9.14e-31 | 25 |
pro-T cell | 9.14e-31 | 25 |
leukocyte | 4.11e-29 | 136 |
CD8-positive, alpha-beta T cell | 1.32e-27 | 11 |
nongranular leukocyte | 1.94e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 6.25e-25 | 120 |
hematopoietic stem cell | 3.00e-21 | 168 |
hematopoietic cell | 1.47e-19 | 177 |
B cell | 1.89e-19 | 14 |
hematopoietic oligopotent progenitor cell | 6.60e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.60e-18 | 161 |
CD4-positive, alpha-beta T cell | 4.76e-16 | 6 |
lymphocyte of B lineage | 2.48e-10 | 24 |
pro-B cell | 2.48e-10 | 24 |
naive T cell | 9.33e-09 | 3 |
single nucleate cell | 1.66e-08 | 3 |
mononuclear cell | 1.66e-08 | 3 |
natural killer cell | 2.63e-08 | 3 |
pro-NK cell | 2.63e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.12e-12 | 15 |
haemolymphatic fluid | 1.12e-12 | 15 |
organism substance | 1.12e-12 | 15 |