FFCP PHASE1:Hg19::chr14:61929781..61929801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |EntrezGene=5583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |HGNC=9403 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000555233_5end | |association_with_transcript=0bp_to_ENST00000555233_5end | ||
|cluster_id=chr14:61929781..61929801,+ | |||
|description=CAGE_peak_27_at_PRKCH_5end | |description=CAGE_peak_27_at_PRKCH_5end | ||
|id=chr14:61929781..61929801,+ | |id=chr14:61929781..61929801,+ | ||
|ontology_enrichment_celltype=CL:0000680!8.02e-17!57;CL:0000056!8.02e-17!57;CL:0000355!8.02e-17!57;CL:0000187!1.92e-13!54;CL:0000183!8.41e-12!59;CL:0000393!1.66e-11!60;CL:0000211!1.66e-11!60;CL:0000055!1.77e-11!180;CL:0000222!4.63e-08!119;CL:0000188!2.12e-07!9;CL:0000064!2.49e-07!3;CL:0005012!2.49e-07!3;CL:0000067!2.49e-07!3;CL:0002304!2.49e-07!3;CL:0000359!3.01e-07!32;CL:0000192!6.19e-07!42;CL:0000514!6.19e-07!42 | |ontology_enrichment_celltype=CL:0000680!8.02e-17!57;CL:0000056!8.02e-17!57;CL:0000355!8.02e-17!57;CL:0000187!1.92e-13!54;CL:0000183!8.41e-12!59;CL:0000393!1.66e-11!60;CL:0000211!1.66e-11!60;CL:0000055!1.77e-11!180;CL:0000222!4.63e-08!119;CL:0000188!2.12e-07!9;CL:0000064!2.49e-07!3;CL:0005012!2.49e-07!3;CL:0000067!2.49e-07!3;CL:0002304!2.49e-07!3;CL:0000359!3.01e-07!32;CL:0000192!6.19e-07!42;CL:0000514!6.19e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000746;4.05e-25;3!CL:0000342;3.56e-19;1!CL:0002565;3.56e-19;1!CL:0000737;4.10e-19;4!CL:0002494;2.44e-18;16!CL:0002548;6.90e-13;6!CL:0002262;1.80e-10;2!CL:1000398;1.80e-10;2!CL:0002593;2.85e-10;2!CL:0002521;2.12e-07;3 | |ontology_enrichment_celltype_v019=CL:0000746;4.05e-25;3!CL:0000342;3.56e-19;1!CL:0002565;3.56e-19;1!CL:0000737;4.10e-19;4!CL:0002494;2.44e-18;16!CL:0002548;6.90e-13;6!CL:0002262;1.80e-10;2!CL:1000398;1.80e-10;2!CL:0002593;2.85e-10;2!CL:0002521;2.12e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,5.50e-25,3;CL:0000513,5.50e-25,3;CL:0000342,2.25e-19,1;CL:0002565,2.25e-19,1;CL:0000737,5.15e-19,4;CL:0002494,2.49e-18,16;CL:0002548,6.12e-13,6;CL:0002262,1.57e-10,2;CL:1000398,1.57e-10,2;CL:0002593,2.99e-10,2;CL:0002521,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;4.05e-25;3!UBERON:0004140;3.56e-19;1 | |ontology_enrichment_development_v019=CL:0000513;4.05e-25;3!UBERON:0004140;3.56e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.94e-15!61;UBERON:0002036!2.94e-15!61;UBERON:0003082!2.94e-15!61;UBERON:0004290!4.40e-15!70;UBERON:0000914!4.63e-15!83;UBERON:0002329!4.63e-15!83;UBERON:0003077!4.63e-15!83;UBERON:0003059!4.63e-15!83;UBERON:0007282!4.63e-15!83;UBERON:0009618!4.63e-15!83;UBERON:0007285!4.63e-15!83;UBERON:0002385!1.49e-14!63;UBERON:0001015!1.49e-14!63;UBERON:0000383!1.49e-14!63;UBERON:0000486!8.23e-13!82;UBERON:0005256!3.81e-11!143;UBERON:0000488!1.50e-09!4;UBERON:0002200!6.41e-09!11;UBERON:0006876!6.41e-09!11;UBERON:0000481!8.99e-09!347;UBERON:0000490!1.08e-08!138;UBERON:0002100!8.38e-08!216;UBERON:0004535!1.40e-07!110;UBERON:0003104!2.37e-07!238;UBERON:0009142!2.37e-07!238;UBERON:0001778!2.49e-07!3;UBERON:0001775!2.49e-07!3;UBERON:0001009!3.33e-07!113;UBERON:0002049!9.45e-07!79;UBERON:0007798!9.45e-07!79 | |ontology_enrichment_uberon=UBERON:0001134!2.94e-15!61;UBERON:0002036!2.94e-15!61;UBERON:0003082!2.94e-15!61;UBERON:0004290!4.40e-15!70;UBERON:0000914!4.63e-15!83;UBERON:0002329!4.63e-15!83;UBERON:0003077!4.63e-15!83;UBERON:0003059!4.63e-15!83;UBERON:0007282!4.63e-15!83;UBERON:0009618!4.63e-15!83;UBERON:0007285!4.63e-15!83;UBERON:0002385!1.49e-14!63;UBERON:0001015!1.49e-14!63;UBERON:0000383!1.49e-14!63;UBERON:0000486!8.23e-13!82;UBERON:0005256!3.81e-11!143;UBERON:0000488!1.50e-09!4;UBERON:0002200!6.41e-09!11;UBERON:0006876!6.41e-09!11;UBERON:0000481!8.99e-09!347;UBERON:0000490!1.08e-08!138;UBERON:0002100!8.38e-08!216;UBERON:0004535!1.40e-07!110;UBERON:0003104!2.37e-07!238;UBERON:0009142!2.37e-07!238;UBERON:0001778!2.49e-07!3;UBERON:0001775!2.49e-07!3;UBERON:0001009!3.33e-07!113;UBERON:0002049!9.45e-07!79;UBERON:0007798!9.45e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.73e-20;22!UBERON:0002506;3.56e-19;1!UBERON:0001769;3.56e-19;1!UBERON:0007100;4.72e-18;25!UBERON:0003513;2.69e-11;7!UBERON:0001281;1.80e-10;2!UBERON:0003497;1.80e-10;2!UBERON:0003909;1.80e-10;2!UBERON:0003835;1.80e-10;2!UBERON:0002456;2.85e-10;2!UBERON:0002190;2.12e-07;3!UBERON:0001280;2.12e-07;3!UBERON:0004647;2.12e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000948;1.73e-20;22!UBERON:0002506;3.56e-19;1!UBERON:0001769;3.56e-19;1!UBERON:0007100;4.72e-18;25!UBERON:0003513;2.69e-11;7!UBERON:0001281;1.80e-10;2!UBERON:0003497;1.80e-10;2!UBERON:0003909;1.80e-10;2!UBERON:0003835;1.80e-10;2!UBERON:0002456;2.85e-10;2!UBERON:0002190;2.12e-07;3!UBERON:0001280;2.12e-07;3!UBERON:0004647;2.12e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,2.25e-19,1;UBERON:0001769,2.25e-19,1;UBERON:0000948,9.16e-19,24;UBERON:0005498,9.16e-19,24;UBERON:0004140,9.16e-19,24;UBERON:0009881,9.16e-19,24;UBERON:0004141,9.16e-19,24;UBERON:0003084,9.16e-19,24;UBERON:0007005,9.16e-19,24;UBERON:0004139,9.16e-19,24;UBERON:0004291,9.16e-19,24;UBERON:0007100,1.07e-16,27;UBERON:0003513,2.55e-11,7;UBERON:0001281,1.57e-10,2;UBERON:0003497,1.57e-10,2;UBERON:0003909,1.57e-10,2;UBERON:0003835,1.57e-10,2;UBERON:0004872,2.65e-10,83;UBERON:0002456,2.99e-10,2;UBERON:0004535,4.25e-10,109;UBERON:0001009,8.18e-10,112;UBERON:0001280,1.93e-07,3;UBERON:0004647,1.93e-07,3;UBERON:0005171,1.93e-07,3;UBERON:0002190,2.19e-07,3;UBERON:0003914,3.40e-07,117 | |||
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| ||
|short_description=p27@PRKCH | |short_description=p27@PRKCH | ||
}} | }} |
Latest revision as of 21:54, 24 September 2015
Short description: | p27@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555233_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 5.50e-25 | 3 |
cardiac muscle myoblast | 5.50e-25 | 3 |
pigment cell (sensu Vertebrata) | 2.25e-19 | 1 |
iris pigment epithelial cell | 2.25e-19 | 1 |
striated muscle cell | 5.15e-19 | 4 |
cardiocyte | 2.49e-18 | 16 |
cardiac fibroblast | 6.12e-13 | 6 |
endothelial cell of sinusoid | 1.57e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.57e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 2.99e-10 | 2 |
subcutaneous fat cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 2.25e-19 | 1 |
iris | 2.25e-19 | 1 |
heart | 9.16e-19 | 24 |
primitive heart tube | 9.16e-19 | 24 |
primary heart field | 9.16e-19 | 24 |
anterior lateral plate mesoderm | 9.16e-19 | 24 |
heart tube | 9.16e-19 | 24 |
heart primordium | 9.16e-19 | 24 |
cardiac mesoderm | 9.16e-19 | 24 |
cardiogenic plate | 9.16e-19 | 24 |
heart rudiment | 9.16e-19 | 24 |
primary circulatory organ | 1.07e-16 | 27 |
trunk blood vessel | 2.55e-11 | 7 |
hepatic sinusoid | 1.57e-10 | 2 |
abdomen blood vessel | 1.57e-10 | 2 |
sinusoid | 1.57e-10 | 2 |
abdominal segment blood vessel | 1.57e-10 | 2 |
splanchnic layer of lateral plate mesoderm | 2.65e-10 | 83 |
internal thoracic artery | 2.99e-10 | 2 |
cardiovascular system | 4.25e-10 | 109 |
circulatory system | 8.18e-10 | 112 |
liver parenchyma | 1.93e-07 | 3 |
liver lobule | 1.93e-07 | 3 |
hepatic duct | 1.93e-07 | 3 |
subcutaneous adipose tissue | 2.19e-07 | 3 |
epithelial tube | 3.40e-07 | 117 |