FFCP PHASE1:Hg19::chr18:9334857..9334871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57045 | |EntrezGene=57045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12429 | |HGNC=12429 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZX9 | |UniProt=Q9GZX9 | ||
|association_with_transcript=92bp_to_ENST00000262120,NM_020648,uc002knz.2,uc002koa.2_5end | |association_with_transcript=92bp_to_ENST00000262120,NM_020648,uc002knz.2,uc002koa.2_5end | ||
|cluster_id=chr18:9334857..9334871,+ | |||
|coexpression_cluster_id=C3743 | |||
|description=CAGE_peak_3_at_TWSG1_5end | |description=CAGE_peak_3_at_TWSG1_5end | ||
|id=chr18:9334857..9334871,+ | |id=chr18:9334857..9334871,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-33!180;CL:0000057!7.66e-20!75;CL:0000680!1.62e-15!57;CL:0000056!1.62e-15!57;CL:0000355!1.62e-15!57;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0000187!2.03e-14!54;CL:0000183!4.06e-14!59;CL:0000222!3.26e-13!119;CL:0000393!1.50e-11!60;CL:0000211!1.50e-11!60;CL:0000220!3.34e-11!246;CL:0002321!5.51e-11!248;CL:0000359!7.47e-11!32;CL:0002371!1.00e-10!591;CL:0002620!7.34e-10!23;CL:0000144!1.44e-09!625;CL:0000499!1.72e-07!27;CL:0000012!1.80e-07!682;CL:0000548!2.54e-07!679;CL:0000004!2.54e-07!679;CL:0000255!2.54e-07!679;CL:0002334!6.49e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.03e-33!180;CL:0000057!7.66e-20!75;CL:0000680!1.62e-15!57;CL:0000056!1.62e-15!57;CL:0000355!1.62e-15!57;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0000187!2.03e-14!54;CL:0000183!4.06e-14!59;CL:0000222!3.26e-13!119;CL:0000393!1.50e-11!60;CL:0000211!1.50e-11!60;CL:0000220!3.34e-11!246;CL:0002321!5.51e-11!248;CL:0000359!7.47e-11!32;CL:0002371!1.00e-10!591;CL:0002620!7.34e-10!23;CL:0000144!1.44e-09!625;CL:0000499!1.72e-07!27;CL:0000012!1.80e-07!682;CL:0000548!2.54e-07!679;CL:0000004!2.54e-07!679;CL:0000255!2.54e-07!679;CL:0002334!6.49e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.73e-11;23!CL:0000192;3.39e-11;43!CL:0000359;8.21e-11;32!CL:0000057;5.11e-09;73!CL:0000187;6.48e-09;55!CL:0000499;8.60e-08;28!CL:0002334;1.36e-07;12!CL:0002320;1.70e-07;188!CL:0000048;7.33e-07;58!CL:0000393;8.58e-07;61!CL:0000211;8.58e-07;61!CL:0000134;9.86e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.79e-22,76;CL:0000680,9.12e-18,58;CL:0000056,9.12e-18,58;CL:0000355,9.12e-18,58;CL:0000192,1.36e-16,43;CL:0000514,1.36e-16,43;CL:0000187,1.62e-16,55;CL:0000393,1.07e-13,61;CL:0000211,1.07e-13,61;CL:0000222,1.09e-12,121;CL:0000359,4.29e-12,32;CL:0000048,1.53e-11,427;CL:0002620,2.61e-11,23;CL:0000723,1.09e-10,433;CL:0000034,3.27e-10,441;CL:0002321,7.77e-09,250;CL:0000499,1.37e-08,28;CL:0002334,1.24e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.39e-11;43!CL:0000355;8.95e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.45e-18!83;UBERON:0002329!1.45e-18!83;UBERON:0003077!1.45e-18!83;UBERON:0003059!1.45e-18!83;UBERON:0007282!1.45e-18!83;UBERON:0009618!1.45e-18!83;UBERON:0007285!1.45e-18!83;UBERON:0004290!2.56e-15!70;UBERON:0000486!9.87e-15!82;UBERON:0002049!1.82e-14!79;UBERON:0007798!1.82e-14!79;UBERON:0005256!3.24e-13!143;UBERON:0001134!4.58e-13!61;UBERON:0002036!4.58e-13!61;UBERON:0003082!4.58e-13!61;UBERON:0002385!5.07e-13!63;UBERON:0001015!5.07e-13!63;UBERON:0000383!5.07e-13!63;UBERON:0001637!1.09e-11!42;UBERON:0003509!1.09e-11!42;UBERON:0004572!1.09e-11!42;UBERON:0000475!1.11e-11!365;UBERON:0000490!1.18e-11!138;UBERON:0000468!2.01e-11!659;UBERON:0004872!1.43e-10!84;UBERON:0000055!1.64e-10!69;UBERON:0004573!3.05e-10!33;UBERON:0004571!3.05e-10!33;UBERON:0003102!4.31e-10!95;UBERON:0001981!4.32e-10!60;UBERON:0007500!4.32e-10!60;UBERON:0004537!4.32e-10!60;UBERON:0006965!4.32e-10!60;UBERON:0002100!6.21e-10!216;UBERON:0004535!2.37e-09!110;UBERON:0001009!1.16e-08!113;UBERON:0002199!1.87e-08!45;UBERON:0002416!1.87e-08!45;UBERON:0000467!3.04e-08!625;UBERON:0000480!5.18e-08!626;UBERON:0000481!7.45e-08!347;UBERON:0002097!1.88e-07!40;UBERON:0000119!2.02e-07!312;UBERON:0000947!2.62e-07!21;UBERON:0010191!2.62e-07!21;UBERON:0000483!3.70e-07!309;UBERON:0003914!4.08e-07!118;UBERON:0003104!7.95e-07!238;UBERON:0009142!7.95e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!1.45e-18!83;UBERON:0002329!1.45e-18!83;UBERON:0003077!1.45e-18!83;UBERON:0003059!1.45e-18!83;UBERON:0007282!1.45e-18!83;UBERON:0009618!1.45e-18!83;UBERON:0007285!1.45e-18!83;UBERON:0004290!2.56e-15!70;UBERON:0000486!9.87e-15!82;UBERON:0002049!1.82e-14!79;UBERON:0007798!1.82e-14!79;UBERON:0005256!3.24e-13!143;UBERON:0001134!4.58e-13!61;UBERON:0002036!4.58e-13!61;UBERON:0003082!4.58e-13!61;UBERON:0002385!5.07e-13!63;UBERON:0001015!5.07e-13!63;UBERON:0000383!5.07e-13!63;UBERON:0001637!1.09e-11!42;UBERON:0003509!1.09e-11!42;UBERON:0004572!1.09e-11!42;UBERON:0000475!1.11e-11!365;UBERON:0000490!1.18e-11!138;UBERON:0000468!2.01e-11!659;UBERON:0004872!1.43e-10!84;UBERON:0000055!1.64e-10!69;UBERON:0004573!3.05e-10!33;UBERON:0004571!3.05e-10!33;UBERON:0003102!4.31e-10!95;UBERON:0001981!4.32e-10!60;UBERON:0007500!4.32e-10!60;UBERON:0004537!4.32e-10!60;UBERON:0006965!4.32e-10!60;UBERON:0002100!6.21e-10!216;UBERON:0004535!2.37e-09!110;UBERON:0001009!1.16e-08!113;UBERON:0002199!1.87e-08!45;UBERON:0002416!1.87e-08!45;UBERON:0000467!3.04e-08!625;UBERON:0000480!5.18e-08!626;UBERON:0000481!7.45e-08!347;UBERON:0002097!1.88e-07!40;UBERON:0000119!2.02e-07!312;UBERON:0000947!2.62e-07!21;UBERON:0010191!2.62e-07!21;UBERON:0000483!3.70e-07!309;UBERON:0003914!4.08e-07!118;UBERON:0003104!7.95e-07!238;UBERON:0009142!7.95e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.59e-10;33!UBERON:0004571;5.59e-10;33!UBERON:0001637;1.58e-08;42!UBERON:0003509;1.58e-08;42!UBERON:0004572;1.58e-08;42!UBERON:0000947;2.56e-07;21!UBERON:0010191;2.56e-07;21!UBERON:0002049;7.15e-07;75!UBERON:0007798;7.15e-07;75 | |||
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| ||
|short_description=p3@TWSG1 | |short_description=p3@TWSG1 | ||
}} | }} |
Latest revision as of 21:54, 24 September 2015
Short description: | p3@TWSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TWSG1_5end |
Coexpression cluster: | C3743_Smooth_Fibroblast_clear_basal_normal_sacrococcigeal_Preadipocyte |
Association with transcript: | 92bp_to_ENST00000262120, NM_020648, uc002knz.2, uc002koa.2_5end |
EntrezGene: | TWSG1 |
HGNC: | 12429 |
UniProt: | Q9GZX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.79e-22 | 76 |
muscle precursor cell | 9.12e-18 | 58 |
myoblast | 9.12e-18 | 58 |
multi-potent skeletal muscle stem cell | 9.12e-18 | 58 |
smooth muscle cell | 1.36e-16 | 43 |
smooth muscle myoblast | 1.36e-16 | 43 |
muscle cell | 1.62e-16 | 55 |
electrically responsive cell | 1.07e-13 | 61 |
electrically active cell | 1.07e-13 | 61 |
mesodermal cell | 1.09e-12 | 121 |
vascular associated smooth muscle cell | 4.29e-12 | 32 |
multi fate stem cell | 1.53e-11 | 427 |
skin fibroblast | 2.61e-11 | 23 |
somatic stem cell | 1.09e-10 | 433 |
stem cell | 3.27e-10 | 441 |
embryonic cell | 7.77e-09 | 250 |
stromal cell | 1.37e-08 | 28 |
preadipocyte | 1.24e-07 | 12 |