FFCP PHASE1:Hg19::chr18:9334857..9334871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=57045 | |EntrezGene=57045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=12429 | |HGNC=12429 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9GZX9 | |UniProt=Q9GZX9 | ||
|association_with_transcript=92bp_to_ENST00000262120,NM_020648,uc002knz.2,uc002koa.2_5end | |association_with_transcript=92bp_to_ENST00000262120,NM_020648,uc002knz.2,uc002koa.2_5end | ||
|cluster_id=chr18:9334857..9334871,+ | |||
|coexpression_cluster_id=C3743 | |coexpression_cluster_id=C3743 | ||
|description=CAGE_peak_3_at_TWSG1_5end | |description=CAGE_peak_3_at_TWSG1_5end |
Latest revision as of 21:54, 24 September 2015
Short description: | p3@TWSG1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TWSG1_5end |
Coexpression cluster: | C3743_Smooth_Fibroblast_clear_basal_normal_sacrococcigeal_Preadipocyte |
Association with transcript: | 92bp_to_ENST00000262120, NM_020648, uc002knz.2, uc002koa.2_5end |
EntrezGene: | TWSG1 |
HGNC: | 12429 |
UniProt: | Q9GZX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@TWSG1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.79e-22 | 76 |
muscle precursor cell | 9.12e-18 | 58 |
myoblast | 9.12e-18 | 58 |
multi-potent skeletal muscle stem cell | 9.12e-18 | 58 |
smooth muscle cell | 1.36e-16 | 43 |
smooth muscle myoblast | 1.36e-16 | 43 |
muscle cell | 1.62e-16 | 55 |
electrically responsive cell | 1.07e-13 | 61 |
electrically active cell | 1.07e-13 | 61 |
mesodermal cell | 1.09e-12 | 121 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
somite | 1.15e-17 | 71 |
presomitic mesoderm | 1.15e-17 | 71 |
presumptive segmental plate | 1.15e-17 | 71 |
dermomyotome | 1.15e-17 | 71 |
trunk paraxial mesoderm | 1.15e-17 | 71 |
dense mesenchyme tissue | 1.89e-17 | 73 |
paraxial mesoderm | 4.77e-17 | 72 |
presumptive paraxial mesoderm | 4.77e-17 | 72 |
multilaminar epithelium | 1.12e-16 | 83 |
unilaminar epithelium | 1.69e-16 | 148 |
Showing 1 to 10 of 48 entries