FFCP PHASE1:Hg19::chr19:7812446..7812473,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30835 | |EntrezGene=30835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1641 | |HGNC=1641 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NNX6,G5E9C4,F5H0Y7,B2R907,B4E2A8 | |UniProt=Q9NNX6,G5E9C4,F5H0Y7,B2R907,B4E2A8 | ||
|association_with_transcript=0bp_to_ENST00000204801,ENST00000301357,ENST00000315591,ENST00000315599,ENST00000354397,ENST00000394161,ENST00000394173,ENST00000540789,NM_001144893,NM_001144894,NM_001144895,NM_001144896,NM_001144897,NM_001144899,NM_021155,NR_026692,uc002mhq.2,uc002mhr.2,uc002mhs.2,uc002mht.2,uc002mhu.2,uc002mhv.2,uc002mhw.2,uc002mhx.2,uc010dvp.2,uc010dvq.2,uc010dvr.2,uc010xju.1_5end | |association_with_transcript=0bp_to_ENST00000204801,ENST00000301357,ENST00000315591,ENST00000315599,ENST00000354397,ENST00000394161,ENST00000394173,ENST00000540789,NM_001144893,NM_001144894,NM_001144895,NM_001144896,NM_001144897,NM_001144899,NM_021155,NR_026692,uc002mhq.2,uc002mhr.2,uc002mhs.2,uc002mht.2,uc002mhu.2,uc002mhv.2,uc002mhw.2,uc002mhx.2,uc010dvp.2,uc010dvq.2,uc010dvr.2,uc010xju.1_5end | ||
|cluster_id=chr19:7812446..7812473,- | |||
|coexpression_cluster_id=C1560 | |||
|description=CAGE_peak_3_at_CD209_5end | |description=CAGE_peak_3_at_CD209_5end | ||
|id=chr19:7812446..7812473,- | |id=chr19:7812446..7812473,- | ||
|ontology_enrichment_celltype=CL:0002194!1.58e-15!63;CL:0000576!1.58e-15!63;CL:0000040!1.58e-15!63;CL:0000559!1.58e-15!63;CL:0002009!8.02e-15!65;CL:0000839!3.08e-13!70;CL:0000557!5.99e-13!71;CL:0000766!1.27e-11!76;CL:0002619!7.63e-08!3 | |ontology_enrichment_celltype=CL:0002194!1.58e-15!63;CL:0000576!1.58e-15!63;CL:0000040!1.58e-15!63;CL:0000559!1.58e-15!63;CL:0002009!8.02e-15!65;CL:0000839!3.08e-13!70;CL:0000557!5.99e-13!71;CL:0000766!1.27e-11!76;CL:0002619!7.63e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;6.24e-24;3!CL:0000235;3.15e-20;6!CL:0000840;2.68e-12;5!CL:0000990;2.35e-08;8!CL:0000451;6.52e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,6.25e-24,3;CL:0000235,3.75e-20,6;CL:0002194,6.52e-16,59;CL:0000576,6.52e-16,59;CL:0000040,6.52e-16,59;CL:0000559,6.52e-16,59;CL:0002009,2.50e-15,61;CL:0000839,5.04e-14,66;CL:0000557,8.72e-14,67;CL:0000766,1.08e-12,72;CL:0000840,2.68e-12,5;CL:0001029,2.68e-12,5;CL:0000990,2.35e-08,8;CL:0000763,8.55e-08,108;CL:0000049,8.55e-08,108;CL:0002087,3.39e-07,115;CL:0000451,6.52e-07,10;CL:0002031,8.20e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.88e-09;1!UBERON:0000358;7.45e-09;1!UBERON:0003124;1.37e-08;1!UBERON:0010227;1.37e-08;1!UBERON:0010226;1.37e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-37!115;UBERON:0002371!1.09e-10!80;UBERON:0002193!1.24e-10!112;UBERON:0002390!1.25e-10!102;UBERON:0003061!1.25e-10!102;UBERON:0002405!3.09e-10!115;UBERON:0001474!1.85e-09!86;UBERON:0000062!7.49e-09!511;UBERON:0000468!7.93e-08!659;UBERON:0004151!2.70e-07!3;UBERON:0004765!4.50e-07!101;UBERON:0001434!4.50e-07!101;UBERON:0003978!5.74e-07!3;UBERON:0009751!5.74e-07!3;UBERON:0000946!5.74e-07!3;UBERON:0002523!5.74e-07!3;UBERON:0005983!5.74e-07!3;UBERON:0002165!5.74e-07!3;UBERON:0002062!5.74e-07!3;UBERON:0007280!5.74e-07!3;UBERON:0000922!6.80e-07!612;UBERON:0000467!7.98e-07!625;UBERON:0000480!8.90e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!5.85e-37!115;UBERON:0002371!1.09e-10!80;UBERON:0002193!1.24e-10!112;UBERON:0002390!1.25e-10!102;UBERON:0003061!1.25e-10!102;UBERON:0002405!3.09e-10!115;UBERON:0001474!1.85e-09!86;UBERON:0000062!7.49e-09!511;UBERON:0000468!7.93e-08!659;UBERON:0004151!2.70e-07!3;UBERON:0004765!4.50e-07!101;UBERON:0001434!4.50e-07!101;UBERON:0003978!5.74e-07!3;UBERON:0009751!5.74e-07!3;UBERON:0000946!5.74e-07!3;UBERON:0002523!5.74e-07!3;UBERON:0005983!5.74e-07!3;UBERON:0002165!5.74e-07!3;UBERON:0002062!5.74e-07!3;UBERON:0007280!5.74e-07!3;UBERON:0000922!6.80e-07!612;UBERON:0000467!7.98e-07!625;UBERON:0000480!8.90e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.26e-10;3!UBERON:0002363;4.88e-09;1!UBERON:0000029;5.70e-09;1!UBERON:0007029;1.37e-08;1!UBERON:0002084;1.37e-08;1!UBERON:0002079;1.37e-08;1!UBERON:0002135;1.37e-08;1!UBERON:0001301;1.37e-08;1!UBERON:0002082;1.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.36e-12,76;UBERON:0002405,3.80e-11,93;UBERON:0001474,6.63e-11,82;UBERON:0004151,8.90e-11,3;UBERON:0004765,9.30e-10,90;UBERON:0003081,1.21e-09,203;UBERON:0002193,2.76e-09,108;UBERON:0002363,4.89e-09,1;UBERON:0007645,4.89e-09,1;UBERON:0007647,4.89e-09,1;UBERON:0010115,4.89e-09,1;UBERON:0000029,5.70e-09,1;UBERON:0002084,8.36e-09,1;UBERON:0002082,8.36e-09,1;UBERON:0010226,8.36e-09,1;UBERON:0002390,8.51e-09,98;UBERON:0003061,8.51e-09,98;UBERON:0001301,1.05e-08,1;UBERON:0002135,1.13e-08,1;UBERON:0007029,1.22e-08,1;UBERON:0002079,1.32e-08,1;UBERON:0001434,1.40e-08,100 | |||
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| ||
|short_description=p3@CD209 | |short_description=p3@CD209 | ||
}} | }} |
Latest revision as of 21:57, 24 September 2015
Short description: | p3@CD209 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD209_5end |
Coexpression cluster: | C1560_CD14_Dendritic_Macrophage_dura_Monocytederived_lymph_left |
Association with transcript: | 0bp_to_ENST00000204801, ENST00000301357, ENST00000315591, ENST00000315599, ENST00000354397, ENST00000394161, ENST00000394173, ENST00000540789, NM_001144893, NM_001144894, NM_001144895, NM_001144896, NM_001144897, NM_001144899, NM_021155, NR_026692, uc002mhq.2, uc002mhr.2, uc002mhs.2, uc002mht.2, uc002mhu.2, uc002mhv.2, uc002mhw.2, uc002mhx.2, uc010dvp.2, uc010dvq.2, uc010dvr.2, uc010xju.1_5end |
EntrezGene: | CD209 |
HGNC: | 1641 |
UniProt: | Q9NNX6G5E9C4F5H0Y7B2R907B4E2A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 6.25e-24 | 3 |
macrophage | 3.75e-20 | 6 |
monopoietic cell | 6.52e-16 | 59 |
monocyte | 6.52e-16 | 59 |
monoblast | 6.52e-16 | 59 |
promonocyte | 6.52e-16 | 59 |
macrophage dendritic cell progenitor | 2.50e-15 | 61 |
myeloid lineage restricted progenitor cell | 5.04e-14 | 66 |
granulocyte monocyte progenitor cell | 8.72e-14 | 67 |
myeloid leukocyte | 1.08e-12 | 72 |
immature conventional dendritic cell | 2.68e-12 | 5 |
common dendritic progenitor | 2.68e-12 | 5 |
conventional dendritic cell | 2.35e-08 | 8 |
myeloid cell | 8.55e-08 | 108 |
common myeloid progenitor | 8.55e-08 | 108 |
nongranular leukocyte | 3.39e-07 | 115 |
dendritic cell | 6.52e-07 | 10 |
hematopoietic lineage restricted progenitor cell | 8.20e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.36e-12 | 76 |
immune system | 3.80e-11 | 93 |
bone element | 6.63e-11 | 82 |
cardiac chamber | 8.90e-11 | 3 |
skeletal element | 9.30e-10 | 90 |
lateral plate mesoderm | 1.21e-09 | 203 |
hemolymphoid system | 2.76e-09 | 108 |
dura mater | 4.89e-09 | 1 |
future meninx | 4.89e-09 | 1 |
ectomeninx | 4.89e-09 | 1 |
future dura mater | 4.89e-09 | 1 |
lymph node | 5.70e-09 | 1 |
heart left ventricle | 8.36e-09 | 1 |
cardiac ventricle | 8.36e-09 | 1 |
future cardiac ventricle | 8.36e-09 | 1 |
hematopoietic system | 8.51e-09 | 98 |
blood island | 8.51e-09 | 98 |
epididymis | 1.05e-08 | 1 |
mitral valve | 1.13e-08 | 1 |
surface | 1.22e-08 | 1 |
left cardiac atrium | 1.32e-08 | 1 |
skeletal system | 1.40e-08 | 100 |