FFCP PHASE1:Hg19::chr5:137514782..137514827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10112 | |EntrezGene=10112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9787 | |HGNC=9787 | ||
|TSSclassifier=strong | |||
|UniProt=B4DL79 | |UniProt=B4DL79 | ||
|association_with_transcript=-21bp_to_ENST00000508792_5end | |association_with_transcript=-21bp_to_ENST00000508792_5end | ||
|cluster_id=chr5:137514782..137514827,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_KIF20A_5end | |description=CAGE_peak_1_at_KIF20A_5end | ||
|id=chr5:137514782..137514827,+ | |id=chr5:137514782..137514827,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.30e-20!679;CL:0000004!2.30e-20!679;CL:0000255!2.30e-20!679;CL:0000012!7.78e-20!682;CL:0000066!2.98e-16!254;CL:0002321!4.64e-12!248;CL:0000055!1.04e-11!180;CL:0000003!1.69e-11!722;CL:0000220!1.85e-11!246;CL:0000144!8.07e-09!625;CL:0000076!3.26e-08!62;CL:0000063!2.15e-07!578;CL:0000213!3.43e-07!57;CL:0000215!3.43e-07!57;CL:0000333!4.96e-07!41;CL:0000133!5.00e-07!59;CL:0000222!7.70e-07!119 | |ontology_enrichment_celltype=CL:0000548!2.30e-20!679;CL:0000004!2.30e-20!679;CL:0000255!2.30e-20!679;CL:0000012!7.78e-20!682;CL:0000066!2.98e-16!254;CL:0002321!4.64e-12!248;CL:0000055!1.04e-11!180;CL:0000003!1.69e-11!722;CL:0000220!1.85e-11!246;CL:0000144!8.07e-09!625;CL:0000076!3.26e-08!62;CL:0000063!2.15e-07!578;CL:0000213!3.43e-07!57;CL:0000215!3.43e-07!57;CL:0000333!4.96e-07!41;CL:0000133!5.00e-07!59;CL:0000222!7.70e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.21e-16,253;CL:0002321,2.76e-11,250;CL:0000076,5.90e-08,63;CL:0000213,3.76e-07,58;CL:0000215,3.76e-07,58;CL:0000133,4.11e-07,59;CL:0000333,4.79e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.49e-38!235;DOID:14566!2.41e-36!239;DOID:0050686!1.82e-17!137;DOID:0050687!1.51e-16!143;DOID:2531!8.36e-16!51;DOID:0060083!8.36e-16!51;DOID:305!1.19e-12!106;DOID:1240!5.51e-12!39;DOID:8692!1.37e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.22e-10;39!DOID:2531;5.66e-10;51!DOID:0060083;5.66e-10;51!DOID:8692;1.51e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.11e-37,235;DOID:14566,1.04e-35,239;DOID:0050686,6.10e-17,137;DOID:2531,3.89e-16,51;DOID:0060083,3.89e-16,51;DOID:0050687,4.39e-16,143;DOID:1240,3.15e-12,39;DOID:305,3.69e-12,106;DOID:8692,9.37e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0,0,10.3208253330634,4.18680700783456,13.980247816331,3.69273769519835,5.5694858832021,1.98838425436749,2.01697543935533,1.80808358407193,3.65155045193687,0.487932798790507,21.2999430472843,8.16002764977012,6.58254915103984,36.0657343785131,37.9142157451889,29.2514350255891,25.5984909255637,26.6826915712324,26.997797990592,0,0,0.464448369948228,5.51652734687356,9.638589400904,0.739508020333575,32.4587570431464,24.8796156852988,5.28480790802725,0,0,0,0.671746422719773,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,1.32208974556972,0,0,0,0.382273228125229,0,0,8.95505888235262,0,0,0,1.33749196312542,0,0,0,7.91014243884732,0,0,0,8.32593578216889,6.37290803043403,8.87964684859851,10.2249506580764,12.7513357723423,0,0,0,10.197840842781,0,0,0,0.318565414324097,0,0.950452044448374,0.451725357233318,0,0,0.473554504088034,0,0,0,0,0,16.0968206328873,23.398848817366,39.0354284575332,4.01070328508712,3.33146993609895,10.3387173116643,2.91980922181582,31.0074200298143,9.53436409089025,12.7360439255033,0.785874452986276,7.65020105414339,8.15725774125745,0,0,0.132957960518865,0,0,0,23.6527264766379,7.74211135595512,13.5384795626962,9.61023501270816,5.03399323451887,19.8084990196849,25.2883909509541,4.39308490587859,3.5576626268671,4.68608857870538,16.1131726843659,5.32190474002959,6.10155143870424,20.2214694190228,5.67099363517232,33.3087986499618,15.7170560838319,24.7745257063309,10.7321646226118,28.4779697870439,11.9081133554765,0,0,6.97750483428055,1.49091585508596,20.5141428896619,0,14.3418310374407,18.4427558743146,8.41016400213461,3.20246987189115,2.71334303258876,14.0044965929895,11.3156964538538,24.8462092732457,7.56787138224657,1.72852777344,15.4652145010306,4.37024107562449,14.2617955386112,1.04614076386261,31.7073146338165,19.748499212912,25.983399239916,8.37032102145062,25.5495380008477,3.82305390350332,5.94001428641027,2.96720315134268,9.10161361938026,2.15585442544872,35.0139117024458,36.1592522429976,14.1302698896933,14.9252391099485,9.50112166976961,3.60571341375832,24.0476228299245,26.011497174885,1.92201649936711,2.96704661623387,23.107014398499,8.34725486831355,9.53269998168828,3.35010341396862,32.4050557903231,13.251432701923,30.796920457782,2.02509777013059,2.26304479546337,12.0703261455649,13.9037895554144,24.2471647003997,1.35282597214308,5.45492241181669,2.86804595389004,28.5418472343253,25.8433048226896,22.8902067452951,18.4516677927359,31.5401063594535,21.8986415445498,3.12899064659632,1.28648187638577,17.9575397758225,0,0,27.3288708092039,28.4908126231992,32.7775000641535,23.7132041374647,24.6203771824419,28.2352036742205,24.9437920096304,28.8445553734259,22.700082259837,14.763109092493,5.60967095213783,4.5273141246454,1.47008711385542,0,0,0,35.7585110525867,15.127577940803,20.4165694255245,1.31700342490351,7.86812272803337,6.93649909640253,12.59202854156,11.4032906858614,5.19967392639789,12.9898207822746,12.4045533323332,2.58299127318808,17.1796072835678,24.5382321665604,9.13219930726072,15.8040879591855,17.1697232418975,2.21595305478658,5.6161023633417,8.02608276359133,1.87467667973554,1.84780341018745,4.11147782002921,10.9261397697475,15.9848666182679,13.8017764499476,2.46331618947972,9.15703713737551,0.829312462163088,0.144119953416961,0.25248486685276,14.668013581491,9.16772221339866,25.7878383862103,6.84289784090821,5.75833959138612,17.4198973549472,4.28739648945867,33.1908009662268,23.5418437169971,48.5499452134689,0.258543431515556,0,16.060752298564,1.86156681609409,4.16029747645464,19.5477604439228,1.41849132023278,7.45982101245078,6.29103172095849,0,21.4042487563,21.4985881633865,7.81862287233601,29.3022192985369,0,0,2.99918973546171,0,0,2.10833939483032,2.87549826589899,0,5.70547620162874,5.79125226670317,6.98619496671304,10.5645968311538,9.63932238344335,0,0,0,15.4997720775703,9.10978977003352,2.31986643833309,6.8681668787083,3.18969375826582,0,0,0.414415513436035,0.613457458595699,3.50119364741774,2.17012018959788,1.45579603071565,5.53129865271201,3.31175071571263,3.04567678981054,0,0,2.0694614258501,24.5763471458112,9.40282759562686,13.9013783148933,2.34961388955289,0.686286847621712,0,0,0.106727557803444,3.63753085735511,11.6504807657348,9.97887967987945,0.992431231275107,2.91577749247319,0.561320188866147,0.384417447767103,3.07024349440022,0,1.48418066444991,20.2014698881479,4.43904313282818,22.9956036838666,9.34657972530518,8.59956800603698,14.0196961526282,1.20303882181971,0,32.8369321750775,17.2986609606381,0.917870904715969,9.92639148396306,15.0179907353609,8.62784746094541,8.76835347919564,10.8718177759662,12.5106722477986,14.6280586537803,25.4780781000524,0,9.48312531403485,5.01689773854853,8.92066955657634,2.49322802678617,6.49236788694317,49.1142123686893,39.2153176537351,31.2869152641995,16.0727176392856,4.22991913063594,1.13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| ||
|short_description=p1@KIF20A | |short_description=p1@KIF20A | ||
}} | }} |
Latest revision as of 22:00, 24 September 2015
Short description: | p1@KIF20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIF20A_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | -21bp_to_ENST00000508792_5end |
EntrezGene: | KIF20A |
HGNC: | 9787 |
UniProt: | B4DL79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.21e-16 | 253 |
embryonic cell | 2.76e-11 | 250 |
squamous epithelial cell | 5.90e-08 | 63 |
lining cell | 3.76e-07 | 58 |
barrier cell | 3.76e-07 | 58 |
neurectodermal cell | 4.11e-07 | 59 |
migratory neural crest cell | 4.79e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.11e-37 | 235 |
disease of cellular proliferation | 1.04e-35 | 239 |
organ system cancer | 6.10e-17 | 137 |
hematologic cancer | 3.89e-16 | 51 |
immune system cancer | 3.89e-16 | 51 |
cell type cancer | 4.39e-16 | 143 |
leukemia | 3.15e-12 | 39 |
carcinoma | 3.69e-12 | 106 |
myeloid leukemia | 9.37e-09 | 31 |