FFCP PHASE1:Hg19::chr19:7852354..7852363,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440508 | |EntrezGene=440508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33502 | |HGNC=33502 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000512667,NR_002931,uc002mij.2,uc010xjy.1_5end | |association_with_transcript=-6bp_to_ENST00000512667,NR_002931,uc002mij.2,uc010xjy.1_5end | ||
|cluster_id=chr19:7852354..7852363,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_CLEC4GP1_5end | |description=CAGE_peak_2_at_CLEC4GP1_5end | ||
|id=chr19:7852354..7852363,+ | |id=chr19:7852354..7852363,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.20e-147;3!UBERON:0005754;5.12e-50;1!UBERON:0007297;8.10e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-26!115;UBERON:0004733!4.51e-22!12;UBERON:0002028!4.51e-22!12;UBERON:0007277!4.51e-22!12;UBERON:0004732!2.63e-20!13;UBERON:0006947!1.36e-17!3;UBERON:0004054!1.36e-17!3;UBERON:0003076!1.77e-17!15;UBERON:0003057!1.77e-17!15;UBERON:0001896!4.84e-17!3;UBERON:0005290!4.84e-17!3;UBERON:0010096!4.84e-17!3;UBERON:0005904!2.51e-13!4;UBERON:0002081!1.29e-12!2;UBERON:0002298!4.54e-11!8;UBERON:0002680!2.23e-10!9;UBERON:0001895!2.23e-10!9;UBERON:0010092!2.23e-10!9;UBERON:0002037!2.26e-09!6;UBERON:0006215!2.26e-09!6;UBERON:0004151!1.09e-08!3;UBERON:0003135!3.36e-08!11;UBERON:0000998!3.32e-07!1;UBERON:0006868!3.32e-07!1;UBERON:0002134!3.73e-07!1;UBERON:0005208!3.73e-07!1;UBERON:0005946!3.73e-07!1;UBERON:0005965!3.73e-07!1;UBERON:0002078!3.73e-07!1;UBERON:0002079!3.95e-07!1;UBERON:0000029!4.69e-07!1;UBERON:0001000!4.97e-07!1;UBERON:0005352!4.97e-07!1;UBERON:0002363!5.26e-07!1;UBERON:0007647!5.26e-07!1;UBERON:0010115!5.26e-07!1;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1;UBERON:0001301!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.92e-74;6!UBERON:0000998;5.12e-50;1!UBERON:0006868;5.12e-50;1!UBERON:0002680;6.09e-50;9!UBERON:0001895;6.09e-50;9!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0006947;1.03e-17;3!UBERON:0004054;1.03e-17;3!UBERON:0005904;1.21e-13;4!UBERON:0000473;1.75e-07;8!UBERON:0000073;7.90e-07;53!UBERON:0002616;7.90e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.31e-74,6;UBERON:0006215,3.31e-74,6;UBERON:0000998,3.99e-50,1;UBERON:0006868,3.99e-50,1;UBERON:0002680,6.62e-50,9;UBERON:0001895,6.62e-50,9;UBERON:0010092,6.62e-50,9;UBERON:0004733,9.76e-38,12;UBERON:0002028,9.76e-38,12;UBERON:0007277,9.76e-38,12;UBERON:0004732,6.32e-35,13;UBERON:0003076,2.01e-30,15;UBERON:0003057,2.01e-30,15;UBERON:0006947,9.46e-18,3;UBERON:0004054,9.46e-18,3;UBERON:0005904,1.13e-13,4;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0007023,8.86e-08,114;UBERON:0000473,1.69e-07,8;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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|short_description=p2@CLEC4GP1 | |short_description=p2@CLEC4GP1 | ||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p2@CLEC4GP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLEC4GP1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -6bp_to_ENST00000512667, NR_002931, uc002mij.2, uc010xjy.1_5end |
EntrezGene: | CLEC4GP1 |
HGNC: | 33502 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.31e-74 | 6 |
rhombic lip | 3.31e-74 | 6 |
seminal vesicle | 3.99e-50 | 1 |
seminal fluid secreting gland | 3.99e-50 | 1 |
regional part of metencephalon | 6.62e-50 | 9 |
metencephalon | 6.62e-50 | 9 |
future metencephalon | 6.62e-50 | 9 |
segmental subdivision of hindbrain | 9.76e-38 | 12 |
hindbrain | 9.76e-38 | 12 |
presumptive hindbrain | 9.76e-38 | 12 |
segmental subdivision of nervous system | 6.32e-35 | 13 |
posterior neural tube | 2.01e-30 | 15 |
chordal neural plate | 2.01e-30 | 15 |
male genital duct | 9.46e-18 | 3 |
internal male genitalia | 9.46e-18 | 3 |
duct of male reproductive system | 1.13e-13 | 4 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
adult organism | 8.86e-08 | 114 |
testis | 1.69e-07 | 8 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |