FFCP PHASE1:Hg19::chr3:133748943..133748955,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:133748943..133748955,- to FFCP PHASE1:Hg19::chr3:133748943..133748955,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6578 | |EntrezGene=6578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10955 | |HGNC=10955 | ||
|TSSclassifier=strong | |||
|UniProt=Q92959 | |UniProt=Q92959 | ||
|association_with_transcript=-23bp_to_ENST00000310926,NM_005630,uc003eqa.3,uc003eqb.3,uc010htw.1,uc011blv.1_5end | |||
|cluster_id=chr3:133748943..133748955,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_3_at_SLCO2A1_5end | |||
|id=chr3:133748943..133748955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;5.51e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.31e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.92e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-26!115;UBERON:0000468!2.03e-10!659;UBERON:0000477!2.45e-10!286;UBERON:0003103!1.26e-09!69;UBERON:0000481!2.11e-09!347;UBERON:0000153!3.33e-09!129;UBERON:0007811!3.33e-09!129;UBERON:0000467!4.27e-09!625;UBERON:0000480!5.28e-09!626;UBERON:0004111!3.40e-08!241;UBERON:0000033!3.63e-08!123;UBERON:0000062!1.14e-07!511;UBERON:0000475!1.19e-07!365;UBERON:0000064!3.36e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;5.58e-09;2!UBERON:0002133;5.58e-09;2!UBERON:0006947;9.38e-07;3!UBERON:0004054;9.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-12,114;UBERON:0003887,4.74e-12,12;UBERON:0002133,3.62e-09,2;UBERON:0004876,3.87e-09,11;UBERON:0002081,4.60e-09,2;UBERON:0010227,4.60e-09,2;UBERON:0000080,1.51e-07,9;UBERON:0002120,1.51e-07,9;UBERON:0004875,1.51e-07,9;UBERON:0005721,1.51e-07,9;UBERON:0005754,1.51e-07,9;UBERON:0007297,1.51e-07,9;UBERON:0000058,3.18e-07,19;UBERON:0005172,7.91e-07,54;UBERON:0005173,7.91e-07,54;UBERON:0006947,9.43e-07,3;UBERON:0004054,9.43e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.982935746006035,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,1.60057375499824,1.83600622119828,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.850813354476611,0.221729397462564,0.614843499851882,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0.516833518338658,1.42306505074684,0.33472061276467,1.20848795132744,0.760272105718513,1.70843440283719,0,0,0.17859945656816,0,1.12611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55605517699883,0.538842688278752,0.490385709340376,0.756787138224657,2.88087962239999,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0.900273288253207,0,0.257640540045629,0.18611685633159,0,0,1.26216887122057,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0.368738337083406,0,1.37060810223918,0.343143423810856,0,0,0,0,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0.316654886678627,4.54933536283586,0.340187410553031,1.29549549661284,3.08454505380579,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0.429680979473094,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.699869440489966,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0.422250816255987,0.796991953004279,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,1.92411999991631,0,0,0.508507300585533,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0.139423744278603,0.692552326534174,0,0,0,0.760531603454056,0.638002319463839,0.457987967009312,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,1.83309043480088,0.296521128680622,1.11207545051853,0.730953646538188,0.067401132980677,0,0,0,0,0,8.68085686268659,0,0.30607276163049,1.32691817219825,0,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0,0.873633341210151,0,0,0.0730893170861856,0,1.06687918137261,0,0.225980740780532,0,0,0.316553979779393,0,5.29048213660123,1.70762395791482,0,0,0,0,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0,0,0,0,1.67569440763353,0,2.87149209830726,0.798716001995964,0.429226048136571,0.669514372325618,0.671834724867263,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,1.18208560948797,1.36381929150995,0.211200673038813,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.906496732161005,0.146552233678082,0,0,0.13223260174269,0,0,2.34932307648928,3.93010762749165,2.48543433208317,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.124192805882767,0,1.24980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.428883182749851,0,0,0.463044948647668,0.489473409012935,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0,0.276629009856872,0.161475645631851,0,0,0.11796972334774,0,0.808679663052368,0,0,0,0.676892955143315,0.60511520611056,0.781514011233092,0,0,0,0.135075169236789,0,0,0.253663240775627,0,1.09651553371436,1.48863353516788,0,0.383287282918786,0,0,0,0.227662191351298,1.68534503309014,0,0,0.135939465953663,0.460409414939944,0.472775363535873,0,1.25588948560822,0.157115589916002,0,0,0.215927591218621,0,1.1436247068265,0,0,0,0.801711364730253,0.207216164163037,0.51215543128185,0,1.29068207646083,0,0,10.1612892045823,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0.301925687133347,0.617393264863557,0,0,0.245148321753905,0,0,0,0.8453114551668,0.169927114687817,4.32326022707326,3.35181017462601,0,0.357107877211315,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.833565680400634,0,0,0.103432995861895,0.852935927603924,0.476128862927481,0.193766729508018,0.372448285775147,0,1.2729431655633,0,0.653150243690884,1.02669990325584,1.41439311330634,0.860666464712116,0.99798106963804,0,0,0,0,0,0.977931553462932,0,2.66302709674205,1.40891655513718,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.982935746006035,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,1.60057375499824,1.83600622119828,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.850813354476611,0.221729397462564,0.614843499851882,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0.516833518338658,1.42306505074684,0.33472061276467,1.20848795132744,0.760272105718513,1.70843440283719,0,0,0.17859945656816,0,1.12611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55605517699883,0.538842688278752,0.490385709340376,0.756787138224657,2.88087962239999,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0.900273288253207,0,0.257640540045629,0.18611685633159,0,0,1.26216887122057,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0.368738337083406,0,1.37060810223918,0.343143423810856,0,0,0,0,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0.316654886678627,4.54933536283586,0.340187410553031,1.29549549661284,3.08454505380579,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0.429680979473094,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.699869440489966,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0.422250816255987,0.796991953004279,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,1.92411999991631,0,0,0.508507300585533,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0.139423744278603,0.692552326534174,0,0,0,0.760531603454056,0.638002319463839,0.457987967009312,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,1.83309043480088,0.296521128680622,1.11207545051853,0.730953646538188,0.067401132980677,0,0,0,0,0,8.68085686268659,0,0.30607276163049,1.32691817219825,0,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0,0.873633341210151,0,0,0.0730893170861856,0,1.06687918137261,0,0.225980740780532,0,0,0.316553979779393,0,5.29048213660123,1.70762395791482,0,0,0,0,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0,0,0,0,1.67569440763353,0,2.87149209830726,0.798716001995964,0.429226048136571,0.669514372325618,0.671834724867263,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,1.18208560948797,1.36381929150995,0.211200673038813,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.906496732161005,0.146552233678082,0,0,0.13223260174269,0,0,2.34932307648928,3.93010762749165,2.48543433208317,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.124192805882767,0,1.24980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.428883182749851,0,0,0.463044948647668,0.489473409012935,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0,0.276629009856872,0.161475645631851,0,0,0.11796972334774,0,0.808679663052368,0,0,0,0.676892955143315,0.60511520611056,0.781514011233092,0,0,0,0.135075169236789,0,0,0.253663240775627,0,1.09651553371436,1.48863353516788,0,0.383287282918786,0,0,0,0.227662191351298,1.68534503309014,0,0,0.135939465953663,0.460409414939944,0.472775363535873,0,1.25588948560822,0.157115589916002,0,0,0.215927591218621,0,1.1436247068265,0,0,0,0.801711364730253,0.207216164163037,0.51215543128185,0,1.29068207646083,0,0,10.1612892045823,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0.301925687133347,0.617393264863557,0,0,0.245148321753905,0,0,0,0.8453114551668,0.169927114687817,4.32326022707326,3.35181017462601,0,0.357107877211315,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.833565680400634,0,0,0.103432995861895,0.852935927603924,0.476128862927481,0.193766729508018,0.372448285775147,0,1.2729431655633,0,0.653150243690884,1.02669990325584,1.41439311330634,0.860666464712116,0.99798106963804,0,0,0,0,0,0.977931553462932,0,2.66302709674205,1.40891655513718,0 | ||
|short_description=p3@SLCO2A1 | |||
}} | }} |
Latest revision as of 22:11, 24 September 2015
Short description: | p3@SLCO2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLCO2A1_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -23bp_to_ENST00000310926, NM_005630, uc003eqa.3, uc003eqb.3, uc010htw.1, uc011blv.1_5end |
EntrezGene: | SLCO2A1 |
HGNC: | 10955 |
UniProt: | Q92959 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.31e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.70e-12 | 114 |
intraembryonic coelom | 4.74e-12 | 12 |
atrioventricular valve | 3.62e-09 | 2 |
urogenital ridge | 3.87e-09 | 11 |
cardiac atrium | 4.60e-09 | 2 |
future cardiac atrium | 4.60e-09 | 2 |
mesonephros | 1.51e-07 | 9 |
pronephros | 1.51e-07 | 9 |
nephrogenic cord | 1.51e-07 | 9 |
pronephric mesoderm | 1.51e-07 | 9 |
rostral part of nephrogenic cord | 1.51e-07 | 9 |
presumptive pronephric mesoderm | 1.51e-07 | 9 |
duct | 3.18e-07 | 19 |
abdomen element | 7.91e-07 | 54 |
abdominal segment element | 7.91e-07 | 54 |
male genital duct | 9.43e-07 | 3 |
internal male genitalia | 9.43e-07 | 3 |