FFCP PHASE1:Hg19::chr1:211499971..211499982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7188 | |EntrezGene=7188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12035 | |HGNC=12035 | ||
|TSSclassifier=strong | |||
|UniProt=O00463,Q6FHY1 | |UniProt=O00463,Q6FHY1 | ||
|association_with_transcript=14bp_to_ENST00000336184,ENST00000462410,NM_004619,uc001hih.2_5end | |association_with_transcript=14bp_to_ENST00000336184,ENST00000462410,NM_004619,uc001hih.2_5end | ||
|cluster_id=chr1:211499971..211499982,+ | |||
|description=CAGE_peak_3_at_TRAF5_5end | |description=CAGE_peak_3_at_TRAF5_5end | ||
|id=chr1:211499971..211499982,+ | |id=chr1:211499971..211499982,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.14e-10!140;CL:0002031!1.86e-10!124;CL:0002087!3.13e-10!119;CL:0000557!6.44e-07!71;CL:0002032!8.40e-07!165;CL:0000837!8.40e-07!165;CL:0000037!8.45e-07!172;CL:0000566!8.45e-07!172 | |ontology_enrichment_celltype=CL:0000738!1.14e-10!140;CL:0002031!1.86e-10!124;CL:0002087!3.13e-10!119;CL:0000557!6.44e-07!71;CL:0002032!8.40e-07!165;CL:0000837!8.40e-07!165;CL:0000037!8.45e-07!172;CL:0000566!8.45e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.28e-14;13!CL:0000235;9.00e-14;6!CL:0000990;1.82e-11;8!CL:0002619;5.27e-11;3!CL:0000148;1.06e-10;10!CL:0000453;1.27e-09;5!CL:0002567;1.97e-09;3!CL:0000451;2.96e-09;10!CL:0000147;1.98e-07;14!CL:0000945;4.85e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.12e-13,6;CL:0000236,2.27e-13,14;CL:0000990,1.17e-11,8;CL:0000738,1.27e-11,136;CL:0002619,5.28e-11,3;CL:0002031,7.70e-11,120;CL:0000148,9.91e-11,10;CL:0000541,9.91e-11,10;CL:0000453,1.35e-09,5;CL:0002567,1.42e-09,3;CL:0002032,1.45e-09,161;CL:0000837,1.45e-09,161;CL:0000451,2.08e-09,10;CL:0000557,3.36e-09,67;CL:0000037,7.17e-09,168;CL:0000839,3.37e-08,66;CL:0000988,4.59e-08,177;CL:0002087,1.26e-07,115;CL:0000147,1.89e-07,14;CL:0000763,2.96e-07,108;CL:0000049,2.96e-07,108;CL:0000766,3.18e-07,72;CL:0000945,3.42e-07,24;CL:0000826,3.42e-07,24;CL:0002009,8.67e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.82e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-18!115;UBERON:0002193!6.51e-09!112;UBERON:0003080!7.17e-09!42;UBERON:0002780!1.86e-08!41;UBERON:0001890!1.86e-08!41;UBERON:0006240!1.86e-08!41;UBERON:0000955!1.92e-08!69;UBERON:0006238!1.92e-08!69;UBERON:0001049!2.11e-08!57;UBERON:0005068!2.11e-08!57;UBERON:0006241!2.11e-08!57;UBERON:0007135!2.11e-08!57;UBERON:0002390!3.43e-08!102;UBERON:0003061!3.43e-08!102;UBERON:0002616!9.17e-08!59;UBERON:0001893!3.09e-07!34;UBERON:0002791!7.46e-07!33;UBERON:0001869!9.58e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.91e-08,93;UBERON:0002193,5.04e-08,108;UBERON:0002371,1.17e-07,76;UBERON:0001474,7.96e-07,82 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.458480434487708,0.410502947249729,0.393553906568396,0,0,0.309632246632152,0,0,0,0,0,0.587200878669695,0,0,0.217010870715852,4.03047853631864,3.88672399222775,5.40908692031792,0.290796477559129,0.377875943688809,0.485168122375632,0.464858073811369,0.822335776043652,0,0,0,0.709446689665756,0,0.645484683583826,0,0,1.36453075028923,0.449446968890169,1.22433556948361,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,1.10483290796269,0.632924774881769,0.211255286311942,0.637812899895131,0.838634582033504,0,0,0.48217676009124,0.285012743741249,0.19891667719909,0,0,1.63841583378639,5.33705552318133,2.13365111283254,0.400395987036012,1.72425731986345,2.64417949113945,0.954053754535364,2.27685187643779,1.17447437874188,1.91136614062614,0,1.12101712596307,0,0,0,0.205601498999509,1.67186495390678,0.651844533267181,0.946895611469467,1.94826728407911,0.668462741311041,1.76763544484902,1.10766947291811,1.62482318259009,0.640456598628376,0.780356085359269,0.657751618414705,0.552700035571697,1.44901542867526,0.593146252648242,0.267540828089713,1.04535523804977,0.906474741580529,0.766440987203842,0,1.51811815211702,0,0.651083453856419,0,0,0.383959833463255,0,0.710331756132051,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0,0.589405839739707,0,0,1.9472843619281,2.96020553408754,0.930705723632056,0,0,0,0,0,0,0,0,0,0,1.55050055501597,0.71153252537342,1.00416183829401,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0.194874010322397,0,0,0,0.710019185033229,0,0,0,0,0,0.487894824518382,0.265059536642971,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.55146986366197,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0,0,0,4.43190610957315,0,1.18904929830983,0,0,0,0,0.290633938513962,0,0,0.704387472105808,1.03664057770386,2.16179930125442,2.27236380167484,2.09543051164158,1.52795370223311,1.17217447210047,1.71072446022705,0.514137463516618,2.10240140490742,2.28661146104463,0.112131084345361,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0,3.64871341923571,4.01805673145701,4.21667878966063,0,0,0,0,0,0,0.448340575974109,0.788123040807709,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0.306923946576125,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0,0.192444225451024,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.714695326373367,1.23408681925858,0.648473311192717,0,0,0,0,0,0.371606350251437,0.144269212976445,0.213425530045242,0,0.798317485731266,0.191505370132367,1.48171507906718,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0,0,0.994147647766298,0.703347082052564,0.333926115068718,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0.358042349351218,0,1.67693789582787,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0.347249989866585,0.885741385813839,0.241192877250816,1.52581736317083,0.110579259931225,0.591095237907095,0,0.21787692703798,0,0.615602068030377,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0.421996129056054,0,0,0,0,0.796118080530053,0,0,0.247127877893006,0.208843899010911,0.606610196826093,0,0.234264445725339,0,0,0.485560759068186,0.394584402849391,0,1.22429104652196,1.20054501294127,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,1.7472666824203,0.51595809741485,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0.3530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| ||
|short_description=p3@TRAF5 | |short_description=p3@TRAF5 | ||
}} | }} |
Latest revision as of 22:46, 24 September 2015
Short description: | p3@TRAF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAF5_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000336184, ENST00000462410, NM_004619, uc001hih.2_5end |
EntrezGene: | TRAF5 |
HGNC: | 12035 |
UniProt: | O00463Q6FHY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.12e-13 | 6 |
B cell | 2.27e-13 | 14 |
conventional dendritic cell | 1.17e-11 | 8 |
leukocyte | 1.27e-11 | 136 |
adult endothelial progenitor cell | 5.28e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 7.70e-11 | 120 |
melanocyte | 9.91e-11 | 10 |
melanoblast | 9.91e-11 | 10 |
Langerhans cell | 1.35e-09 | 5 |
light melanocyte | 1.42e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.45e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-09 | 161 |
dendritic cell | 2.08e-09 | 10 |
granulocyte monocyte progenitor cell | 3.36e-09 | 67 |
hematopoietic stem cell | 7.17e-09 | 168 |
myeloid lineage restricted progenitor cell | 3.37e-08 | 66 |
hematopoietic cell | 4.59e-08 | 177 |
nongranular leukocyte | 1.26e-07 | 115 |
pigment cell | 1.89e-07 | 14 |
myeloid cell | 2.96e-07 | 108 |
common myeloid progenitor | 2.96e-07 | 108 |
myeloid leukocyte | 3.18e-07 | 72 |
lymphocyte of B lineage | 3.42e-07 | 24 |
pro-B cell | 3.42e-07 | 24 |
macrophage dendritic cell progenitor | 8.67e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.91e-08 | 93 |
hemolymphoid system | 5.04e-08 | 108 |
bone marrow | 1.17e-07 | 76 |
bone element | 7.96e-07 | 82 |