FFCP PHASE1:Hg19::chr11:108093656..108093698,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:108093656..108093698,+
|short_description=p3@ATM
|description=CAGE_peak_3_at_ATM_5end
|association_with_transcript=97bp_to_ENST00000278616,NM_000051,uc001...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=472 | |EntrezGene=472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=795 | |HGNC=795 | ||
|TSSclassifier=strong | |||
|UniProt=Q13315 | |UniProt=Q13315 | ||
|association_with_transcript=97bp_to_ENST00000278616,NM_000051,uc001pkb.1,uc009yxr.1_5end | |||
|cluster_id=chr11:108093656..108093698,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_ATM_5end | |||
|id=chr11:108093656..108093698,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.03e-23!53;CL:0000051!1.03e-23!53;CL:0000838!2.93e-23!52;CL:0000037!2.17e-18!172;CL:0000566!2.17e-18!172;CL:0000738!7.94e-18!140;CL:0000988!5.64e-17!182;CL:0002032!5.57e-16!165;CL:0000837!5.57e-16!165;CL:0002087!2.26e-15!119;CL:0000084!3.02e-13!25;CL:0000827!3.02e-13!25;CL:0002031!4.78e-13!124;CL:0000791!1.03e-12!18;CL:0000789!1.03e-12!18;CL:0002420!1.03e-12!18;CL:0002419!1.03e-12!18;CL:0000790!1.03e-12!18;CL:0000945!1.39e-09!24;CL:0000826!1.39e-09!24;CL:0000236!6.86e-09!14;CL:0000625!1.07e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.17e-18;18!CL:0000789;1.17e-18;18!CL:0002419;1.17e-18;18!CL:0000084;3.45e-17;25!CL:0000542;5.42e-17;53!CL:0000236;1.12e-12;13!CL:0000625;1.82e-12;11!CL:0000945;1.57e-09;24!CL:0000624;3.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.36e-28,53;CL:0000051,9.36e-28,53;CL:0000838,4.41e-27,52;CL:0000738,1.30e-19,136;CL:0000791,1.71e-18,18;CL:0000789,1.71e-18,18;CL:0002420,1.71e-18,18;CL:0002419,1.71e-18,18;CL:0000790,1.71e-18,18;CL:0000037,3.52e-18,168;CL:0000988,4.10e-17,177;CL:0000084,6.73e-17,25;CL:0000827,6.73e-17,25;CL:0002087,2.38e-16,115;CL:0002032,1.56e-15,161;CL:0000837,1.56e-15,161;CL:0002031,2.53e-13,120;CL:0000236,1.09e-12,14;CL:0000625,2.13e-12,11;CL:0000945,2.55e-09,24;CL:0000826,2.55e-09,24;CL:0000624,3.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-18;18!CL:0000051;5.42e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.74e-15!115;UBERON:0000178!8.19e-07!15;UBERON:0000179!8.19e-07!15;UBERON:0000463!8.19e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.68e-09;15!UBERON:0000179;1.68e-09;15!UBERON:0000463;1.68e-09;15!UBERON:0002390;8.50e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.13e-14,114;UBERON:0000178,2.16e-09,15;UBERON:0000179,2.16e-09,15;UBERON:0000463,2.16e-09,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.986680828671798,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0.684372125364421,0.502170558379211,0.764134057479513,0.985207073399349,1.10195093839151,1.96682138424452,5.75744097145819,1.23852898652861,0,0,0.739508020333575,2.16908161624845,0.995184627411951,0.880801318004542,3.32397245119126,1.80490002723128,2.60413044859022,3.35873211359887,1.94336199611388,2.83333124397605,0.436194716338694,1.51150377475524,1.4555043671269,0.464858073811369,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0.689491361473237,1.93645405075148,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,0.612167784741805,0,0,0,0.199463657621632,0.852449501065388,0.580418477257168,0,0,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,1.26753171787165,1.06302149982522,0.838634582033504,0.898629049171961,0.901061357049038,1.6072558669708,1.42506371870624,0.59675003159727,1.0959849225878,12.3197371122926,12.561188059029,7.11607403090844,10.2415253415962,8.00791974072025,6.32227683949932,7.93253847341835,11.4486450544244,7.39976859842283,8.80855784056408,8.41001101875504,1.32171328579026,1.68152568894461,1.58030450865046,11.80258620683,5.89516144123747,7.19605246498282,5.01559486172034,11.7332015988093,8.04861269749047,17.534405556712,5.79334375802903,8.24896540929544,10.8551608345974,10.2905468230706,3.97083091149593,2.9913649938772,3.28875809207352,4.14525026678773,8.11448640058147,14.828656316206,20.6006437629079,25.0885257131944,7.7050353034345,11.4966148080576,8.24705869158312,18.4704375174237,17.2025323735012,17.5792532541233,10.4549724889321,13.7023358360773,16.6382594500744,18.7396089828519,13.2595261144649,4.10563998460523,12.4996180799334,7.48832548193821,12.0204255222723,4.87613732627923,0,0.511450247374121,0.722878304769133,0.50133791063589,0.289693037921647,0,0.486634870302636,0.756278537312543,0.443458794925128,0.351339142772504,0.982343066232845,0,0,0,0.696518949197069,0.132957960518865,2.62339686735876,1.71598473234038,2.22874500797739,0,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0,0.735326160691737,0,0.803697554556718,0.898117490504679,0.225222960966644,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.794455084879313,1.14734648299525,0,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.817309515567294,0,0,0,0.312160076830321,0,0,0.587172493218824,0,0.140450806702248,0.61246251376468,0.122834317311768,0.413303124703062,0,0.741800787835671,1.82032272387605,0,0.505008341862199,0.125118519871964,0,0,0,0.600952235626387,0.113432183160021,0.358779271377724,1.06778694409284,0.635795703478686,0.600182192168805,0.206105058476878,0.257640540045629,0,0.675105328965065,0.292311015483596,0.504867548488229,0.552299391853796,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.860413786167011,2.43947412259191,1.98794652482228,1.16193942869518,0.932949495138334,1.26160425437814,2.18986415445498,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0.482022059766964,0.330881918197182,0.435758888184812,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,2.6487785964879,0.737930631258681,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.352226082707465,0.433099343283221,0.462985512576611,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0.283550194484773,0.179117045405697,0,0,0,0.088048434013226,1.4512968087854,1.72943944100354,0.6312121671319,0.952468414382536,1.14596527667483,1.17217447210047,0,0.719792448923265,1.50171528921959,1.71495859578347,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.299918973546171,0,0,2.10833939483032,0.958499421966331,0,0,0.144781306667579,0.410952645100767,0.358121926479791,2.01753259188349,9.85153801009636,6.68445482064504,7.7005821767849,0.508189248444927,0,0,0.335032530668698,0.637938751653163,2.24702107184155,2.99161459204025,3.72973962092432,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0.368738337083406,0.260650843404249,0.391602314925481,0,9.09779314940704,6.25571182373989,6.19019835259977,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0,0,0.385076685522074,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.647747748306418,0,0,0,0.254876273045038,0,0,0.657779629937804,1.0457418040996,0,0,0,1.95777922130672,0.183138929636687,1.07262349896764,0,0,0,0.193341436584244,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.76703964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| ||
|short_description=p3@ATM | |||
}} | }} |
Latest revision as of 23:11, 24 September 2015
Short description: | p3@ATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATM_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 97bp_to_ENST00000278616, NM_000051, uc001pkb.1, uc009yxr.1_5end |
EntrezGene: | ATM |
HGNC: | 795 |
UniProt: | Q13315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.36e-28 | 53 |
common lymphoid progenitor | 9.36e-28 | 53 |
lymphoid lineage restricted progenitor cell | 4.41e-27 | 52 |
leukocyte | 1.30e-19 | 136 |
mature alpha-beta T cell | 1.71e-18 | 18 |
alpha-beta T cell | 1.71e-18 | 18 |
immature T cell | 1.71e-18 | 18 |
mature T cell | 1.71e-18 | 18 |
immature alpha-beta T cell | 1.71e-18 | 18 |
hematopoietic stem cell | 3.52e-18 | 168 |
hematopoietic cell | 4.10e-17 | 177 |
T cell | 6.73e-17 | 25 |
pro-T cell | 6.73e-17 | 25 |
nongranular leukocyte | 2.38e-16 | 115 |
hematopoietic oligopotent progenitor cell | 1.56e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.53e-13 | 120 |
B cell | 1.09e-12 | 14 |
CD8-positive, alpha-beta T cell | 2.13e-12 | 11 |
lymphocyte of B lineage | 2.55e-09 | 24 |
pro-B cell | 2.55e-09 | 24 |
CD4-positive, alpha-beta T cell | 3.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.13e-14 | 114 |
blood | 2.16e-09 | 15 |
haemolymphatic fluid | 2.16e-09 | 15 |
organism substance | 2.16e-09 | 15 |