FFCP PHASE1:Hg19::chr11:108093839..108093850,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=795 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000452508_5end | |||
|cluster_id=chr11:108093839..108093850,+ | |||
|description=CAGE_peak_5_at_ATM_5end | |||
|id=chr11:108093839..108093850,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.99e-23!140;CL:0002087!4.59e-21!119;CL:0000838!5.62e-21!52;CL:0000542!5.65e-21!53;CL:0000051!5.65e-21!53;CL:0002031!3.66e-20!124;CL:0000037!2.11e-17!172;CL:0000566!2.11e-17!172;CL:0000988!2.26e-15!182;CL:0002032!2.79e-15!165;CL:0000837!2.79e-15!165;CL:0000791!7.64e-13!18;CL:0000789!7.64e-13!18;CL:0002420!7.64e-13!18;CL:0002419!7.64e-13!18;CL:0000790!7.64e-13!18;CL:0000945!1.06e-10!24;CL:0000826!1.06e-10!24;CL:0000084!9.07e-10!25;CL:0000827!9.07e-10!25;CL:0000625!1.32e-08!11;CL:0000236!2.06e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-32;18!CL:0000789;1.39e-32;18!CL:0002419;1.39e-32;18!CL:0000084;4.78e-22;25!CL:0000542;8.36e-22;53!CL:0000625;3.91e-20;11!CL:0000236;1.90e-12;13!CL:0000624;2.10e-12;6!CL:0000945;7.92e-11;24!CL:0002087;6.47e-08;104!CL:0000623;1.81e-07;3!CL:0000898;4.26e-07;3!CL:0000226;5.91e-07;3!CL:0000842;5.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.49e-36,52;CL:0000542,1.13e-35,53;CL:0000051,1.13e-35,53;CL:0000791,2.02e-33,18;CL:0000789,2.02e-33,18;CL:0002420,2.02e-33,18;CL:0002419,2.02e-33,18;CL:0000790,2.02e-33,18;CL:0002087,2.19e-26,115;CL:0000738,1.96e-25,136;CL:0000084,1.26e-22,25;CL:0000827,1.26e-22,25;CL:0002031,9.83e-21,120;CL:0000625,3.43e-20,11;CL:0000037,4.67e-19,168;CL:0000988,2.10e-17,177;CL:0002032,3.68e-16,161;CL:0000837,3.68e-16,161;CL:0000624,4.27e-13,6;CL:0000236,7.21e-12,14;CL:0000945,4.46e-11,24;CL:0000826,4.46e-11,24;CL:0000898,1.94e-07,3;CL:0000623,2.26e-07,3;CL:0000825,2.26e-07,3;CL:0000226,3.48e-07,3;CL:0000842,3.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-32;18!CL:0000051;8.36e-22;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-09!102;UBERON:0003061!1.14e-09!102;UBERON:0002193!2.87e-09!112;UBERON:0000178!9.54e-07!15;UBERON:0000179!9.54e-07!15;UBERON:0000463!9.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-10;15!UBERON:0000179;2.20e-10;15!UBERON:0000463;2.20e-10;15!UBERON:0002390;6.55e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.19e-10,15;UBERON:0000179,1.19e-10,15;UBERON:0000463,1.19e-10,15;UBERON:0004177,5.43e-07,7;UBERON:0005057,5.43e-07,7 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,1.14620108621927,0.738905305049512,0.787107813136792,1.18009283054671,1.91914699048606,0.464448369948228,0,0,0,2.32401601740905,0.568676929949686,0.293600439334847,0.553995408531877,0.200544447470142,0.434021741431704,2.46307021663917,1.6194683300949,0.257575567634187,1.16318591023652,0,0.727752183563449,0.464858073811369,0,0.619412741790207,0.28769239232215,0,0.47296445977717,0,0,1.35426486594342,0,0.545812300115692,0.224723484445085,0,0.641858054152187,0.639337125799041,0,0.598390972864896,0.426224750532694,0,1.13477044938228,0,0.502497330513487,1.0429658368404,0.65156653411535,0,0,0.316462387440884,0.422510572623884,0.637812899895131,0.419317291016752,0.22465726229299,0.450530678524519,0.64290234678832,0.285012743741249,0.59675003159727,0.91332076882317,1.75996244461323,1.63841583378639,2.66852776159066,2.56038133539904,2.80277190925209,2.87376219977242,1.98313461835459,5.72432252721218,2.27685187643779,0.587237189370939,0.382273228125229,0,0,0.526768169550154,2.75393678159366,1.96505381374582,1.43921049299656,0.668745981562712,3.91106719960308,1.89379122293893,7.79306913631645,1.11410456885174,1.47302953737419,1.32920336750173,0.270803863765016,1.0247305578054,0.780356085359269,3.4531959966772,1.38175008892924,4.63684937176084,2.81744470007915,4.28065324943541,0,2.71942422474159,1.91610246800961,1.03088233644789,3.54227568827304,2.22995790026868,5.20866763085135,6.65316431113862,3.46322773878877,2.8157054453972,3.74792179657038,4.97232229292435,0.821127996921047,2.41928091869679,1.60464117470104,2.46201486600758,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0,0,0.175669571386252,0.261958150995425,0,0,1.62273696827342,1.0447784237956,1.06366368415092,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0.357198913136319,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.25326102332916,1.85372853138506,0.286836620748814,0,0,0,0.24666754841716,0,0.538842688278752,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0.280901613404497,0.816616685019573,0.122834317311768,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0.831192346452549,0,0.30648779579902,0.150238058906597,0.340296549480063,0.179389635688862,0,0.635795703478686,0.300091096084402,0.515262646192195,0.515281080091258,0.37223371266318,0.843881661206331,0.68205903612839,0,0.368199594569197,0,0,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0.464775771478074,0,0,1.09493207722749,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0.491953754172454,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0.939269553886573,0.288732895522148,0,0,0,0,0.492434012174795,0.936017060556951,0.445893486866185,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0.985326475791887,0.264145302039678,0.414656231081544,0.864719720501769,0.50496973370552,1.33345578013555,0.763976851116555,2.34434894420094,0,0.205654985406647,0.600686115687835,1.71495859578347,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,3.64871341923571,0,0,0.479249710983165,0,0,0.289562613335158,0,0.358121926479791,1.56919201590938,3.15249216323084,1.2937654491571,2.43851768931522,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.468565659970853,0.601892199455438,0,0,0,0.368738337083406,0.173767228936166,0,0,2.48121631347465,1.72571360654893,1.38745825144478,0,0,0,0.744323423456331,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0,0,0.410635780069046,0,0,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0.290033387828457,0.0852266274161009,0.267096106940212,0.661139661443912,0.192190067365106,0.893288987462089,0,0,1.5740617341532,0,0,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.459446800413919,1.52234282769651,2.29391162142713,1.70894156152249,2.62054953003568,0.822724546172388,0.648473311192717,3.7802200606668,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0.577076851905779,0.640276590135727,0.47827881818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| |||
|short_description=p5@ATM | |||
}} |
Latest revision as of 23:14, 24 September 2015
Short description: | p5@ATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000452508_5end |
EntrezGene: | ATM |
HGNC: | 795 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.49e-36 | 52 |
lymphocyte | 1.13e-35 | 53 |
common lymphoid progenitor | 1.13e-35 | 53 |
mature alpha-beta T cell | 2.02e-33 | 18 |
alpha-beta T cell | 2.02e-33 | 18 |
immature T cell | 2.02e-33 | 18 |
mature T cell | 2.02e-33 | 18 |
immature alpha-beta T cell | 2.02e-33 | 18 |
nongranular leukocyte | 2.19e-26 | 115 |
leukocyte | 1.96e-25 | 136 |
T cell | 1.26e-22 | 25 |
pro-T cell | 1.26e-22 | 25 |
hematopoietic lineage restricted progenitor cell | 9.83e-21 | 120 |
CD8-positive, alpha-beta T cell | 3.43e-20 | 11 |
hematopoietic stem cell | 4.67e-19 | 168 |
hematopoietic cell | 2.10e-17 | 177 |
hematopoietic oligopotent progenitor cell | 3.68e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.68e-16 | 161 |
CD4-positive, alpha-beta T cell | 4.27e-13 | 6 |
B cell | 7.21e-12 | 14 |
lymphocyte of B lineage | 4.46e-11 | 24 |
pro-B cell | 4.46e-11 | 24 |
naive T cell | 1.94e-07 | 3 |
natural killer cell | 2.26e-07 | 3 |
pro-NK cell | 2.26e-07 | 3 |
single nucleate cell | 3.48e-07 | 3 |
mononuclear cell | 3.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.19e-10 | 15 |
haemolymphatic fluid | 1.19e-10 | 15 |
organism substance | 1.19e-10 | 15 |
hemopoietic organ | 5.43e-07 | 7 |
immune organ | 5.43e-07 | 7 |