FFCP PHASE1:Hg19::chr5:137911008..137911019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3313 | |EntrezGene=3313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5244 | |HGNC=5244 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3L8 | |UniProt=F5H3L8 | ||
|association_with_transcript=29bp_to_ENST00000541333_5end | |association_with_transcript=29bp_to_ENST00000541333_5end | ||
|cluster_id=chr5:137911008..137911019,- | |||
|description=CAGE_peak_3_at_HSPA9_5end | |description=CAGE_peak_3_at_HSPA9_5end | ||
|id=chr5:137911008..137911019,- | |id=chr5:137911008..137911019,- | ||
|ontology_enrichment_celltype=CL:0000037!5.98e-18!172;CL:0000566!5.98e-18!172;CL:0000988!1.53e-16!182;CL:0002087!3.02e-16!119;CL:0000738!5.71e-16!140;CL:0002032!1.32e-15!165;CL:0000837!1.32e-15!165;CL:0002031!9.47e-15!124;CL:0000542!1.52e-08!53;CL:0000051!1.52e-08!53;CL:0002009!2.50e-08!65;CL:0000838!3.11e-08!52;CL:0000557!4.56e-08!71;CL:0000763!5.39e-08!112;CL:0000049!5.39e-08!112;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25;CL:0002194!1.29e-07!63;CL:0000576!1.29e-07!63;CL:0000040!1.29e-07!63;CL:0000559!1.29e-07!63;CL:0000839!9.00e-07!70 | |ontology_enrichment_celltype=CL:0000037!5.98e-18!172;CL:0000566!5.98e-18!172;CL:0000988!1.53e-16!182;CL:0002087!3.02e-16!119;CL:0000738!5.71e-16!140;CL:0002032!1.32e-15!165;CL:0000837!1.32e-15!165;CL:0002031!9.47e-15!124;CL:0000542!1.52e-08!53;CL:0000051!1.52e-08!53;CL:0002009!2.50e-08!65;CL:0000838!3.11e-08!52;CL:0000557!4.56e-08!71;CL:0000763!5.39e-08!112;CL:0000049!5.39e-08!112;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25;CL:0002194!1.29e-07!63;CL:0000576!1.29e-07!63;CL:0000040!1.29e-07!63;CL:0000559!1.29e-07!63;CL:0000839!9.00e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.33e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.28e-17,168;CL:0000988,5.63e-17,177;CL:0002087,3.44e-16,115;CL:0000738,9.99e-16,136;CL:0002032,2.86e-15,161;CL:0000837,2.86e-15,161;CL:0002031,1.42e-14,120;CL:0000542,1.08e-08,53;CL:0000051,1.08e-08,53;CL:0000838,2.23e-08,52;CL:0002009,3.74e-08,61;CL:0000084,7.70e-08,25;CL:0000827,7.70e-08,25;CL:0000557,8.42e-08,67;CL:0000763,1.30e-07,108;CL:0000049,1.30e-07,108;CL:0002194,1.98e-07,59;CL:0000576,1.98e-07,59;CL:0000040,1.98e-07,59;CL:0000559,1.98e-07,59;CL:0000473,7.97e-07,48;CL:0000234,7.97e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.96e-13!235;DOID:14566!8.66e-13!239;DOID:0050687!9.17e-09!143;DOID:305!1.83e-08!106 | |ontology_enrichment_disease=DOID:162!5.96e-13!235;DOID:14566!8.66e-13!239;DOID:0050687!9.17e-09!143;DOID:305!1.83e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.20e-12,235;DOID:14566,1.63e-12,239;DOID:0050687,1.58e-08,143;DOID:305,3.45e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002020!5.77e-09!34;UBERON:0003528!5.77e-09!34;UBERON:0001869!7.82e-09!32;UBERON:0002780!9.02e-09!41;UBERON:0001890!9.02e-09!41;UBERON:0006240!9.02e-09!41;UBERON:0001893!1.17e-08!34;UBERON:0002619!1.80e-08!22;UBERON:0003080!2.07e-08!42;UBERON:0002791!2.52e-08!33;UBERON:0001950!1.05e-07!20;UBERON:0001049!3.36e-07!57;UBERON:0005068!3.36e-07!57;UBERON:0006241!3.36e-07!57;UBERON:0007135!3.36e-07!57;UBERON:0002390!6.78e-07!102;UBERON:0003061!6.78e-07!102;UBERON:0001474!8.31e-07!86 | |ontology_enrichment_uberon=UBERON:0002020!5.77e-09!34;UBERON:0003528!5.77e-09!34;UBERON:0001869!7.82e-09!32;UBERON:0002780!9.02e-09!41;UBERON:0001890!9.02e-09!41;UBERON:0006240!9.02e-09!41;UBERON:0001893!1.17e-08!34;UBERON:0002619!1.80e-08!22;UBERON:0003080!2.07e-08!42;UBERON:0002791!2.52e-08!33;UBERON:0001950!1.05e-07!20;UBERON:0001049!3.36e-07!57;UBERON:0005068!3.36e-07!57;UBERON:0006241!3.36e-07!57;UBERON:0007135!3.36e-07!57;UBERON:0002390!6.78e-07!102;UBERON:0003061!6.78e-07!102;UBERON:0001474!8.31e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.57e-08;22!UBERON:0001869;3.12e-08;32!UBERON:0003528;6.39e-08;34!UBERON:0002020;6.39e-08;34!UBERON:0002791;8.70e-08;32!UBERON:0001950;1.03e-07;20!UBERON:0001893;1.52e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.84e-09,34;UBERON:0002020,4.84e-09,34;UBERON:0001869,6.60e-09,32;UBERON:0002780,7.59e-09,41;UBERON:0001890,7.59e-09,41;UBERON:0003080,7.59e-09,41;UBERON:0006240,7.59e-09,41;UBERON:0001893,9.94e-09,34;UBERON:0002619,1.47e-08,22;UBERON:0002791,1.84e-08,32;UBERON:0001950,8.81e-08,20;UBERON:0001049,1.01e-07,56;UBERON:0005068,1.01e-07,56;UBERON:0006241,1.01e-07,56;UBERON:0007135,1.01e-07,56;UBERON:0000073,1.48e-07,53;UBERON:0002616,1.48e-07,53;UBERON:0000956,9.53e-07,25;UBERON:0000203,9.53e-07,25 | |||
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| ||
|short_description=p3@HSPA9 | |short_description=p3@HSPA9 | ||
}} | }} |
Latest revision as of 23:22, 24 September 2015
Short description: | p3@HSPA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HSPA9_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000541333_5end |
EntrezGene: | HSPA9 |
HGNC: | 5244 |
UniProt: | F5H3L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.28e-17 | 168 |
hematopoietic cell | 5.63e-17 | 177 |
nongranular leukocyte | 3.44e-16 | 115 |
leukocyte | 9.99e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.86e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.42e-14 | 120 |
lymphocyte | 1.08e-08 | 53 |
common lymphoid progenitor | 1.08e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.23e-08 | 52 |
macrophage dendritic cell progenitor | 3.74e-08 | 61 |
T cell | 7.70e-08 | 25 |
pro-T cell | 7.70e-08 | 25 |
granulocyte monocyte progenitor cell | 8.42e-08 | 67 |
myeloid cell | 1.30e-07 | 108 |
common myeloid progenitor | 1.30e-07 | 108 |
monopoietic cell | 1.98e-07 | 59 |
monocyte | 1.98e-07 | 59 |
monoblast | 1.98e-07 | 59 |
promonocyte | 1.98e-07 | 59 |
defensive cell | 7.97e-07 | 48 |
phagocyte | 7.97e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 4.84e-09 | 34 |
gray matter | 4.84e-09 | 34 |
cerebral hemisphere | 6.60e-09 | 32 |
regional part of forebrain | 7.59e-09 | 41 |
forebrain | 7.59e-09 | 41 |
anterior neural tube | 7.59e-09 | 41 |
future forebrain | 7.59e-09 | 41 |
telencephalon | 9.94e-09 | 34 |
regional part of cerebral cortex | 1.47e-08 | 22 |
regional part of telencephalon | 1.84e-08 | 32 |
neocortex | 8.81e-08 | 20 |
neural tube | 1.01e-07 | 56 |
neural rod | 1.01e-07 | 56 |
future spinal cord | 1.01e-07 | 56 |
neural keel | 1.01e-07 | 56 |
regional part of nervous system | 1.48e-07 | 53 |
regional part of brain | 1.48e-07 | 53 |
cerebral cortex | 9.53e-07 | 25 |
pallium | 9.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.20e-12 | 235 |
disease of cellular proliferation | 1.63e-12 | 239 |
cell type cancer | 1.58e-08 | 143 |
carcinoma | 3.45e-08 | 106 |