FFCP PHASE1:Hg19::chr5:137911357..137911393,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:137911357..137911393,-
|short_description=p5@HSPA9
|description=CAGE_peak_5_at_HSPA9_5end
|association_with_transcript=-39bp_to_NM_004134_5end
|EntrezGene...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3313 | |EntrezGene=3313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5244 | |HGNC=5244 | ||
|TSSclassifier=strong | |||
|UniProt=P38646 | |UniProt=P38646 | ||
|association_with_transcript=-39bp_to_NM_004134_5end | |||
|cluster_id=chr5:137911357..137911393,- | |||
|description=CAGE_peak_5_at_HSPA9_5end | |||
|id=chr5:137911357..137911393,- | |||
|ontology_enrichment_celltype=CL:0000738!4.83e-10!140;CL:0000860!7.29e-10!45;CL:0002057!8.17e-10!42;CL:0000037!2.12e-09!172;CL:0000566!2.12e-09!172;CL:0002031!8.18e-09!124;CL:0002032!2.46e-08!165;CL:0000837!2.46e-08!165;CL:0000988!8.09e-08!182;CL:0002087!9.30e-08!119;CL:0000766!2.51e-07!76;CL:0000557!6.55e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-11;33!CL:0002057;1.31e-11;33!CL:0000473;2.64e-07;39!CL:0000234;2.64e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.53e-15,136;CL:0002087,3.20e-12,115;CL:0002031,4.08e-12,120;CL:0000037,5.42e-12,168;CL:0000988,3.63e-11,177;CL:0000860,7.40e-11,42;CL:0002057,7.40e-11,42;CL:0002032,4.42e-10,161;CL:0000837,4.42e-10,161;CL:0000766,4.16e-09,72;CL:0000557,5.92e-09,67;CL:0000473,1.36e-08,48;CL:0000234,1.36e-08,48;CL:0002009,9.63e-08,61;CL:0000839,7.39e-07,66;CL:0002194,9.33e-07,59;CL:0000576,9.33e-07,59;CL:0000040,9.33e-07,59;CL:0000559,9.33e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-08;42 | |||
|ontology_enrichment_disease=DOID:14566!1.38e-09!239;DOID:162!3.16e-09!235;DOID:0050687!5.40e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.64e-08,98;UBERON:0003061,1.64e-08,98;UBERON:0002371,3.02e-08,76;UBERON:0001474,9.41e-08,82;UBERON:0002193,2.41e-07,108;UBERON:0002405,7.55e-07,93 | |||
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| ||
|short_description=p5@HSPA9 | |||
}} | }} |
Latest revision as of 23:25, 24 September 2015
Short description: | p5@HSPA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HSPA9_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_NM_004134_5end |
EntrezGene: | HSPA9 |
HGNC: | 5244 |
UniProt: | P38646 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.53e-15 | 136 |
nongranular leukocyte | 3.20e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.08e-12 | 120 |
hematopoietic stem cell | 5.42e-12 | 168 |
hematopoietic cell | 3.63e-11 | 177 |
classical monocyte | 7.40e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.40e-11 | 42 |
hematopoietic oligopotent progenitor cell | 4.42e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.42e-10 | 161 |
myeloid leukocyte | 4.16e-09 | 72 |
granulocyte monocyte progenitor cell | 5.92e-09 | 67 |
defensive cell | 1.36e-08 | 48 |
phagocyte | 1.36e-08 | 48 |
macrophage dendritic cell progenitor | 9.63e-08 | 61 |
myeloid lineage restricted progenitor cell | 7.39e-07 | 66 |
monopoietic cell | 9.33e-07 | 59 |
monocyte | 9.33e-07 | 59 |
monoblast | 9.33e-07 | 59 |
promonocyte | 9.33e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.64e-08 | 98 |
blood island | 1.64e-08 | 98 |
bone marrow | 3.02e-08 | 76 |
bone element | 9.41e-08 | 82 |
hemolymphoid system | 2.41e-07 | 108 |
immune system | 7.55e-07 | 93 |