FFCP PHASE1:Hg19::chr12:7942020..7942031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79923 | |EntrezGene=79923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20857 | |HGNC=20857 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL07 | |UniProt=E9PL07 | ||
|association_with_transcript=0bp_to_ENST00000526434_5end | |association_with_transcript=0bp_to_ENST00000526434_5end | ||
|cluster_id=chr12:7942020..7942031,+ | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_2_at_NANOG_5end | |description=CAGE_peak_2_at_NANOG_5end | ||
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|ontology_enrichment_celltype=CL:0002322!1.77e-52!5;CL:0000039!8.81e-38!7;CL:0000586!8.81e-38!7;CL:0000540!7.84e-26!6;CL:0000031!7.84e-26!6;CL:0000404!7.84e-26!6;CL:0000047!1.46e-19!8;CL:0000148!1.47e-07!10;CL:0000541!1.47e-07!10;CL:0000133!7.01e-07!59 | |ontology_enrichment_celltype=CL:0002322!1.77e-52!5;CL:0000039!8.81e-38!7;CL:0000586!8.81e-38!7;CL:0000540!7.84e-26!6;CL:0000031!7.84e-26!6;CL:0000404!7.84e-26!6;CL:0000047!1.46e-19!8;CL:0000148!1.47e-07!10;CL:0000541!1.47e-07!10;CL:0000133!7.01e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.22e-59;6!CL:0000404;1.22e-59;6!CL:0002319;4.96e-14;25!CL:0002322;2.74e-09;5 | |ontology_enrichment_celltype_v019=CL:0000540;1.22e-59;6!CL:0000404;1.22e-59;6!CL:0002319;4.96e-14;25!CL:0002322;2.74e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-59,6;CL:0000031,1.22e-59,6;CL:0000404,1.22e-59,6;CL:0000047,5.04e-45,8;CL:0002319,4.96e-14,25;CL:0000133,4.30e-11,59;CL:0002322,2.74e-09,5;CL:0000221,2.94e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.22e-59;6!CL:0000133;7.79e-08;59 | |ontology_enrichment_development_v019=CL:0000031;1.22e-59;6!CL:0000133;7.79e-08;59 | ||
|ontology_enrichment_disease=DOID:3095!2.59e-12!22;DOID:2994!2.59e-12!22 | |ontology_enrichment_disease=DOID:3095!2.59e-12!22;DOID:2994!2.59e-12!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.96e-33!8;UBERON:0003135!3.13e-24!11;UBERON:0000991!6.96e-13!21;UBERON:0009196!6.96e-13!21;UBERON:0009117!6.96e-13!21;UBERON:0005564!6.96e-13!21;UBERON:0004176!2.59e-12!22;UBERON:0003101!2.59e-12!22;UBERON:0000079!2.59e-12!22 | |ontology_enrichment_uberon=UBERON:0000473!3.96e-33!8;UBERON:0003135!3.13e-24!11;UBERON:0000991!6.96e-13!21;UBERON:0009196!6.96e-13!21;UBERON:0009117!6.96e-13!21;UBERON:0005564!6.96e-13!21;UBERON:0004176!2.59e-12!22;UBERON:0003101!2.59e-12!22;UBERON:0000079!2.59e-12!22 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@NANOG | |short_description=p2@NANOG | ||
}} | }} |
Latest revision as of 23:27, 24 September 2015
Short description: | p2@NANOG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NANOG_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 0bp_to_ENST00000526434_5end |
EntrezGene: | NANOG |
HGNC: | 20857 |
UniProt: | E9PL07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.22e-59 | 6 |
neuroblast | 1.22e-59 | 6 |
electrically signaling cell | 1.22e-59 | 6 |
neuronal stem cell | 5.04e-45 | 8 |
neural cell | 4.96e-14 | 25 |
neurectodermal cell | 4.30e-11 | 59 |
embryonic stem cell | 2.74e-09 | 5 |
ectodermal cell | 2.94e-09 | 72 |