FFCP PHASE1:Hg19::chr9:12695566..12695573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQI3 | |UniProt=E7EQI3 | ||
|association_with_transcript=-146bp_to_ENST00000381136_5end | |association_with_transcript=-146bp_to_ENST00000381136_5end | ||
|cluster_id=chr9:12695566..12695573,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_28_at_TYRP1_5end | |description=CAGE_peak_28_at_TYRP1_5end | ||
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|ontology_enrichment_celltype=CL:0000148!4.96e-65!10;CL:0000541!4.96e-65!10;CL:0000147!1.67e-46!14;CL:0000710!1.38e-32!20;CL:0002567!2.64e-25!3;CL:0000075!3.79e-24!27;CL:0002077!9.37e-20!33;CL:0002566!2.25e-19!1;CL:0000325!1.04e-16!39;CL:0000333!3.80e-15!41;CL:0000133!1.22e-10!59;CL:0000221!7.35e-09!71 | |ontology_enrichment_celltype=CL:0000148!4.96e-65!10;CL:0000541!4.96e-65!10;CL:0000147!1.67e-46!14;CL:0000710!1.38e-32!20;CL:0002567!2.64e-25!3;CL:0000075!3.79e-24!27;CL:0002077!9.37e-20!33;CL:0002566!2.25e-19!1;CL:0000325!1.04e-16!39;CL:0000333!3.80e-15!41;CL:0000133!1.22e-10!59;CL:0000221!7.35e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.26e-101;10!CL:0000147;2.07e-72;14!CL:0000710;7.12e-51;20!CL:0002567;1.23e-38;3!CL:0000075;7.95e-38;27!CL:0002566;3.16e-29;1!CL:0002077;3.57e-28;34!CL:0000149;1.82e-08;4 | |ontology_enrichment_celltype_v019=CL:0000148;4.26e-101;10!CL:0000147;2.07e-72;14!CL:0000710;7.12e-51;20!CL:0002567;1.23e-38;3!CL:0000075;7.95e-38;27!CL:0002566;3.16e-29;1!CL:0002077;3.57e-28;34!CL:0000149;1.82e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.26e-101,10;CL:0000541,4.26e-101,10;CL:0000147,2.07e-72,14;CL:0000710,7.12e-51,20;CL:0002567,1.23e-38,3;CL:0000075,7.95e-38,27;CL:0002077,3.87e-30,34;CL:0002566,3.16e-29,1;CL:0000333,6.39e-24,41;CL:0000133,5.71e-17,59;CL:0000221,4.85e-14,72;CL:0000149,1.82e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.48e-09;59!CL:0000221;6.75e-08;72 | |ontology_enrichment_development_v019=CL:0000133;2.48e-09;59!CL:0000221;6.75e-08;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!3.25e-19!1;UBERON:0002771!3.35e-07!3 | |ontology_enrichment_uberon=UBERON:0007029!3.25e-19!1;UBERON:0002771!3.35e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p28@TYRP1 | |short_description=p28@TYRP1 | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p28@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -146bp_to_ENST00000381136_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | E7EQI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.26e-101 | 10 |
melanoblast | 4.26e-101 | 10 |
pigment cell | 2.07e-72 | 14 |
neurecto-epithelial cell | 7.12e-51 | 20 |
light melanocyte | 1.23e-38 | 3 |
columnar/cuboidal epithelial cell | 7.95e-38 | 27 |
ecto-epithelial cell | 3.87e-30 | 34 |
dark melanocyte | 3.16e-29 | 1 |
migratory neural crest cell | 6.39e-24 | 41 |
neurectodermal cell | 5.71e-17 | 59 |
ectodermal cell | 4.85e-14 | 72 |
visual pigment cell | 1.82e-08 | 4 |