FFCP PHASE1:Hg19::chr9:12695659..12695660,+: Difference between revisions
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|id=chr9:12695659..12695660,+
|short_description=p31@TYRP1
|description=CAGE_peak_31_at_TYRP1_5end
|association_with_transcript=-59bp_to_ENST00000381136_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQI3 | |UniProt=E7EQI3 | ||
|association_with_transcript=-59bp_to_ENST00000381136_5end | |||
|cluster_id=chr9:12695659..12695660,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_31_at_TYRP1_5end | |||
|id=chr9:12695659..12695660,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.22e-61!10;CL:0000541!3.22e-61!10;CL:0000147!1.24e-43!14;CL:0002567!1.84e-38!3;CL:0000710!2.00e-30!20;CL:0000075!2.03e-22!27;CL:0002077!2.99e-18!33;CL:0000325!2.32e-15!39;CL:0002566!3.98e-14!1;CL:0000333!7.02e-14!41;CL:0000133!1.31e-09!59;CL:0000221!6.32e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.92e-107;10!CL:0000147;1.72e-76;14!CL:0002567;2.41e-66;3!CL:0000710;1.27e-53;20!CL:0000075;9.11e-40;27!CL:0002077;7.74e-28;34!CL:0002566;2.09e-23;1!CL:0000149;7.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.07e-107,10;CL:0000541,5.07e-107,10;CL:0000147,1.54e-76,14;CL:0002567,3.01e-66,3;CL:0000710,1.18e-53,20;CL:0000075,8.60e-40,27;CL:0002077,1.26e-31,34;CL:0000333,5.08e-25,41;CL:0002566,1.67e-23,1;CL:0000133,1.23e-17,59;CL:0000221,1.58e-14,72;CL:0000149,8.14e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.23e-09;59!UBERON:0003056;1.35e-08;3!CL:0000221;4.23e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!7.67e-26!2;DOID:3371!1.25e-13!1;DOID:4549!1.25e-13!1;DOID:5861!1.25e-13!1;DOID:6496!1.25e-13!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.06e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002135!1.10e-13!1;UBERON:0002133!1.75e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p31@TYRP1 | |||
}} | }} |
Latest revision as of 23:41, 24 September 2015
Short description: | p31@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -59bp_to_ENST00000381136_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | E7EQI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.07e-107 | 10 |
melanoblast | 5.07e-107 | 10 |
pigment cell | 1.54e-76 | 14 |
light melanocyte | 3.01e-66 | 3 |
neurecto-epithelial cell | 1.18e-53 | 20 |
columnar/cuboidal epithelial cell | 8.60e-40 | 27 |
ecto-epithelial cell | 1.26e-31 | 34 |
migratory neural crest cell | 5.08e-25 | 41 |
dark melanocyte | 1.67e-23 | 1 |
neurectodermal cell | 1.23e-17 | 59 |
ectodermal cell | 1.58e-14 | 72 |
visual pigment cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.90e-12 | 2 |