FFCP PHASE1:Hg19::chr9:12695702..12695719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQI3 | |UniProt=E7EQI3 | ||
|association_with_transcript=0bp_to_ENST00000381136_5end | |association_with_transcript=0bp_to_ENST00000381136_5end | ||
|cluster_id=chr9:12695702..12695719,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_3_at_TYRP1_5end | |description=CAGE_peak_3_at_TYRP1_5end | ||
|id=chr9:12695702..12695719,+ | |id=chr9:12695702..12695719,+ | ||
|ontology_enrichment_celltype=CL:0000147!7.99e-13!14;CL:0000148!1.08e-09!10;CL:0000541!1.08e-09!10;CL:0000149!4.50e-08!4;CL:0002567!3.87e-07!3 | |ontology_enrichment_celltype=CL:0000147!7.99e-13!14;CL:0000148!1.08e-09!10;CL:0000541!1.08e-09!10;CL:0000149!4.50e-08!4;CL:0002567!3.87e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000147;8.97e-24;14!CL:0000148;2.95e-21;10!CL:0002567;3.87e-14;3!CL:0000710;4.30e-10;20!CL:0000149;6.71e-10;4!CL:0002195;1.06e-09;2!CL:0002571;1.06e-09;2!CL:0000075;3.34e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,8.87e-24,14;CL:0000148,2.86e-21,10;CL:0000541,2.86e-21,10;CL:0002567,3.87e-14,3;CL:0000710,4.24e-10,20;CL:0000149,6.81e-10,4;CL:0002195,1.04e-09,2;CL:0002571,1.04e-09,2;CL:0000075,3.31e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;4.18e-10;2!DOID:114;3.53e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.37e-10,2;DOID:114,3.84e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-31!115;UBERON:0005743!3.75e-12!86;UBERON:0003075!1.86e-11!86;UBERON:0007284!1.86e-11!86;UBERON:0002346!2.19e-11!90;UBERON:0000073!5.72e-11!94;UBERON:0001016!5.72e-11!94;UBERON:0001017!4.03e-09!82;UBERON:0000924!1.15e-08!173;UBERON:0006601!1.15e-08!173;UBERON:0004121!1.39e-08!169;UBERON:0001049!1.81e-08!57;UBERON:0005068!1.81e-08!57;UBERON:0006241!1.81e-08!57;UBERON:0007135!1.81e-08!57;UBERON:0001950!4.77e-08!20;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0002616!3.08e-07!59;UBERON:0007100!3.29e-07!27;UBERON:0002619!3.99e-07!22;UBERON:0000483!4.94e-07!309;UBERON:0000119!7.96e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!2.38e-31!115;UBERON:0005743!3.75e-12!86;UBERON:0003075!1.86e-11!86;UBERON:0007284!1.86e-11!86;UBERON:0002346!2.19e-11!90;UBERON:0000073!5.72e-11!94;UBERON:0001016!5.72e-11!94;UBERON:0001017!4.03e-09!82;UBERON:0000924!1.15e-08!173;UBERON:0006601!1.15e-08!173;UBERON:0004121!1.39e-08!169;UBERON:0001049!1.81e-08!57;UBERON:0005068!1.81e-08!57;UBERON:0006241!1.81e-08!57;UBERON:0007135!1.81e-08!57;UBERON:0001950!4.77e-08!20;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0002616!3.08e-07!59;UBERON:0007100!3.29e-07!27;UBERON:0002619!3.99e-07!22;UBERON:0000483!4.94e-07!309;UBERON:0000119!7.96e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.72e-09;25!UBERON:0000966;5.14e-08;5!UBERON:0005388;5.14e-08;5!UBERON:0001802;5.14e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.09e-08,27;UBERON:0000966,9.69e-07,6;UBERON:0005388,9.69e-07,6;UBERON:0001802,9.69e-07,6 | |||
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| ||
|short_description=p3@TYRP1 | |short_description=p3@TYRP1 | ||
}} | }} |
Latest revision as of 23:41, 24 September 2015
Short description: | p3@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000381136_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | E7EQI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 8.87e-24 | 14 |
melanocyte | 2.86e-21 | 10 |
melanoblast | 2.86e-21 | 10 |
light melanocyte | 3.87e-14 | 3 |
neurecto-epithelial cell | 4.24e-10 | 20 |
visual pigment cell | 6.81e-10 | 4 |
hepatic stem cell | 1.04e-09 | 2 |
hepatic mesenchymal stem cell | 1.04e-09 | 2 |
columnar/cuboidal epithelial cell | 3.31e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.09e-08 | 27 |
retina | 9.69e-07 | 6 |
photoreceptor array | 9.69e-07 | 6 |
posterior segment of eyeball | 9.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.37e-10 | 2 |
heart disease | 3.84e-09 | 2 |