FFCP PHASE1:Hg19::chr9:12695726..12695759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQI3 | |UniProt=E7EQI3 | ||
|association_with_transcript=6bp_to_ENST00000381136_5end | |association_with_transcript=6bp_to_ENST00000381136_5end | ||
|cluster_id=chr9:12695726..12695759,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_5_at_TYRP1_5end | |description=CAGE_peak_5_at_TYRP1_5end | ||
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|ontology_enrichment_celltype=CL:0000147!2.87e-13!14;CL:0000148!3.46e-10!10;CL:0000541!3.46e-10!10;CL:0000149!4.32e-08!4;CL:0002567!1.84e-07!3 | |ontology_enrichment_celltype=CL:0000147!2.87e-13!14;CL:0000148!3.46e-10!10;CL:0000541!3.46e-10!10;CL:0000149!4.32e-08!4;CL:0002567!1.84e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.72e-23;10!CL:0000147;1.72e-16;14!CL:0002567;1.55e-15;3!CL:0000710;3.11e-11;20!CL:0002195;1.83e-10;2!CL:0002571;1.83e-10;2!CL:0000075;4.69e-08;27 | |ontology_enrichment_celltype_v019=CL:0000148;1.72e-23;10!CL:0000147;1.72e-16;14!CL:0002567;1.55e-15;3!CL:0000710;3.11e-11;20!CL:0002195;1.83e-10;2!CL:0002571;1.83e-10;2!CL:0000075;4.69e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.69e-23,10;CL:0000541,1.69e-23,10;CL:0000147,1.70e-16,14;CL:0002567,1.52e-15,3;CL:0000710,3.08e-11,20;CL:0002195,1.83e-10,2;CL:0002571,1.83e-10,2;CL:0000075,4.66e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.41e-11;4!UBERON:0007284;3.41e-11;4 | |ontology_enrichment_development_v019=UBERON:0005062;3.41e-11;4!UBERON:0007284;3.41e-11;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.54e-11;2!DOID:114;1.83e-10;2 | |ontology_enrichment_disease_v019=DOID:1909;5.54e-11;2!DOID:114;1.83e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.54e-11,2;DOID:114,1.74e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.01e-28!115;UBERON:0003075!6.17e-13!86;UBERON:0007284!6.17e-13!86;UBERON:0005743!2.15e-12!86;UBERON:0002346!5.56e-12!90;UBERON:0001950!3.25e-11!20;UBERON:0000073!1.88e-10!94;UBERON:0001016!1.88e-10!94;UBERON:0002619!5.79e-10!22;UBERON:0001049!9.93e-10!57;UBERON:0005068!9.93e-10!57;UBERON:0006241!9.93e-10!57;UBERON:0007135!9.93e-10!57;UBERON:0000955!1.67e-09!69;UBERON:0006238!1.67e-09!69;UBERON:0001017!2.36e-09!82;UBERON:0002616!3.11e-09!59;UBERON:0000956!1.85e-08!25;UBERON:0000203!1.85e-08!25;UBERON:0001869!2.94e-08!32;UBERON:0002020!9.86e-08!34;UBERON:0003528!9.86e-08!34;UBERON:0001893!1.38e-07!34;UBERON:0000025!3.20e-07!194;UBERON:0004151!3.87e-07!3;UBERON:0003978!4.19e-07!3;UBERON:0009751!4.19e-07!3;UBERON:0000946!4.19e-07!3;UBERON:0002523!4.19e-07!3;UBERON:0005983!4.19e-07!3;UBERON:0002165!4.19e-07!3;UBERON:0002062!4.19e-07!3;UBERON:0007280!4.19e-07!3;UBERON:0004121!5.98e-07!169;UBERON:0002791!7.77e-07!33;UBERON:0000200!8.79e-07!6;UBERON:0000483!9.49e-07!309;UBERON:0004111!9.58e-07!241;UBERON:0007100!9.70e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!9.01e-28!115;UBERON:0003075!6.17e-13!86;UBERON:0007284!6.17e-13!86;UBERON:0005743!2.15e-12!86;UBERON:0002346!5.56e-12!90;UBERON:0001950!3.25e-11!20;UBERON:0000073!1.88e-10!94;UBERON:0001016!1.88e-10!94;UBERON:0002619!5.79e-10!22;UBERON:0001049!9.93e-10!57;UBERON:0005068!9.93e-10!57;UBERON:0006241!9.93e-10!57;UBERON:0007135!9.93e-10!57;UBERON:0000955!1.67e-09!69;UBERON:0006238!1.67e-09!69;UBERON:0001017!2.36e-09!82;UBERON:0002616!3.11e-09!59;UBERON:0000956!1.85e-08!25;UBERON:0000203!1.85e-08!25;UBERON:0001869!2.94e-08!32;UBERON:0002020!9.86e-08!34;UBERON:0003528!9.86e-08!34;UBERON:0001893!1.38e-07!34;UBERON:0000025!3.20e-07!194;UBERON:0004151!3.87e-07!3;UBERON:0003978!4.19e-07!3;UBERON:0009751!4.19e-07!3;UBERON:0000946!4.19e-07!3;UBERON:0002523!4.19e-07!3;UBERON:0005983!4.19e-07!3;UBERON:0002165!4.19e-07!3;UBERON:0002062!4.19e-07!3;UBERON:0007280!4.19e-07!3;UBERON:0004121!5.98e-07!169;UBERON:0002791!7.77e-07!33;UBERON:0000200!8.79e-07!6;UBERON:0000483!9.49e-07!309;UBERON:0004111!9.58e-07!241;UBERON:0007100!9.70e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;7.43e-15;3!UBERON:0003978;9.17e-15;3!UBERON:0000946;9.17e-15;3!UBERON:0007100;1.09e-13;25!UBERON:0002081;2.48e-10;2!UBERON:0002133;3.06e-10;2!UBERON:0000948;4.29e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004151;7.43e-15;3!UBERON:0003978;9.17e-15;3!UBERON:0000946;9.17e-15;3!UBERON:0007100;1.09e-13;25!UBERON:0002081;2.48e-10;2!UBERON:0002133;3.06e-10;2!UBERON:0000948;4.29e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,8.76e-15,3;UBERON:0003978,1.06e-14,3;UBERON:0009751,1.06e-14,3;UBERON:0000946,1.06e-14,3;UBERON:0002523,1.06e-14,3;UBERON:0005983,1.06e-14,3;UBERON:0002165,1.06e-14,3;UBERON:0002062,1.06e-14,3;UBERON:0007280,1.06e-14,3;UBERON:0007100,1.42e-12,27;UBERON:0002081,2.79e-10,2;UBERON:0010227,2.79e-10,2;UBERON:0002133,3.52e-10,2;UBERON:0007023,7.25e-09,114 | |||
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| ||
|short_description=p5@TYRP1 | |short_description=p5@TYRP1 | ||
}} | }} |
Latest revision as of 23:41, 24 September 2015
Short description: | p5@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 6bp_to_ENST00000381136_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | E7EQI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.69e-23 | 10 |
melanoblast | 1.69e-23 | 10 |
pigment cell | 1.70e-16 | 14 |
light melanocyte | 1.52e-15 | 3 |
neurecto-epithelial cell | 3.08e-11 | 20 |
hepatic stem cell | 1.83e-10 | 2 |
hepatic mesenchymal stem cell | 1.83e-10 | 2 |
columnar/cuboidal epithelial cell | 4.66e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 8.76e-15 | 3 |
valve | 1.06e-14 | 3 |
cardiac mesenchyme | 1.06e-14 | 3 |
cardial valve | 1.06e-14 | 3 |
tunica intima | 1.06e-14 | 3 |
heart layer | 1.06e-14 | 3 |
endocardium | 1.06e-14 | 3 |
endocardial cushion | 1.06e-14 | 3 |
presumptive endocardium | 1.06e-14 | 3 |
primary circulatory organ | 1.42e-12 | 27 |
cardiac atrium | 2.79e-10 | 2 |
future cardiac atrium | 2.79e-10 | 2 |
atrioventricular valve | 3.52e-10 | 2 |
adult organism | 7.25e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.54e-11 | 2 |
heart disease | 1.74e-10 | 2 |