FFCP PHASE1:Hg19::chr3:135915401..135915439,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:135915401..135915439,-
|short_description=p4@MSL2
|description=CAGE_peak_4_at_MSL2_5end
|association_with_transcript=0bp_to_ENST00000491050_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55167 | |EntrezGene=55167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |HGNC=25544 | ||
|TSSclassifier=strong | |||
|UniProt=C9J5S2 | |UniProt=C9J5S2 | ||
|association_with_transcript=0bp_to_ENST00000491050_5end | |||
|cluster_id=chr3:135915401..135915439,- | |||
|description=CAGE_peak_4_at_MSL2_5end | |||
|id=chr3:135915401..135915439,- | |||
|ontology_enrichment_celltype=CL:0000791!1.35e-08!18;CL:0000789!1.35e-08!18;CL:0002420!1.35e-08!18;CL:0002419!1.35e-08!18;CL:0000790!1.35e-08!18;CL:0000084!3.93e-07!25;CL:0000827!3.93e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.32e-10;18!CL:0000789;4.32e-10;18!CL:0002419;4.32e-10;18!CL:0000084;1.83e-08;25!CL:0000625;2.00e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.18e-10,18;CL:0000789,3.18e-10,18;CL:0002420,3.18e-10,18;CL:0002419,3.18e-10,18;CL:0000790,3.18e-10,18;CL:0000084,1.12e-08,25;CL:0000827,1.12e-08,25;CL:0000625,2.61e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.32e-10;18!UBERON:0006601;1.15e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-47!115;UBERON:0001049!2.89e-26!57;UBERON:0005068!2.89e-26!57;UBERON:0006241!2.89e-26!57;UBERON:0007135!2.89e-26!57;UBERON:0001017!4.41e-25!82;UBERON:0005743!8.33e-25!86;UBERON:0000073!3.56e-24!94;UBERON:0001016!3.56e-24!94;UBERON:0002616!7.73e-22!59;UBERON:0000955!6.93e-21!69;UBERON:0006238!6.93e-21!69;UBERON:0002780!1.30e-20!41;UBERON:0001890!1.30e-20!41;UBERON:0006240!1.30e-20!41;UBERON:0003080!2.76e-20!42;UBERON:0002346!5.99e-19!90;UBERON:0003075!9.86e-19!86;UBERON:0007284!9.86e-19!86;UBERON:0000924!9.12e-18!173;UBERON:0006601!9.12e-18!173;UBERON:0004121!2.18e-17!169;UBERON:0002020!3.26e-16!34;UBERON:0003528!3.26e-16!34;UBERON:0001893!4.39e-16!34;UBERON:0000153!1.05e-15!129;UBERON:0007811!1.05e-15!129;UBERON:0002791!1.35e-15!33;UBERON:0001869!6.82e-15!32;UBERON:0000033!6.03e-14!123;UBERON:0003056!1.99e-13!61;UBERON:0002619!9.26e-12!22;UBERON:0000956!2.40e-11!25;UBERON:0000203!2.40e-11!25;UBERON:0001950!9.52e-11!20;UBERON:0003076!3.57e-07!15;UBERON:0003057!3.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.30e-18;41!UBERON:0001890;2.30e-18;41!UBERON:0000073;2.28e-17;53!UBERON:0002616;2.28e-17;53!UBERON:0007023;2.75e-16;114!UBERON:0003528;3.41e-16;34!UBERON:0002020;3.41e-16;34!UBERON:0001893;4.62e-16;34!UBERON:0002791;1.06e-15;32!UBERON:0001869;1.18e-15;32!UBERON:0002619;1.26e-14;22!UBERON:0001950;3.17e-13;20!UBERON:0000956;7.81e-13;25!UBERON:0000203;7.81e-13;25!UBERON:0000955;3.14e-11;68!UBERON:0001017;6.46e-11;75!UBERON:0001016;1.02e-10;83!UBERON:0000125;5.23e-08;9!UBERON:0002308;5.23e-08;9!UBERON:0001894;9.97e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.40e-60,114;UBERON:0001049,5.92e-32,56;UBERON:0005068,5.92e-32,56;UBERON:0006241,5.92e-32,56;UBERON:0007135,5.92e-32,56;UBERON:0000073,1.33e-29,53;UBERON:0002616,1.33e-29,53;UBERON:0001016,8.12e-29,89;UBERON:0001017,8.83e-29,81;UBERON:0002780,1.31e-24,41;UBERON:0001890,1.31e-24,41;UBERON:0003080,1.31e-24,41;UBERON:0006240,1.31e-24,41;UBERON:0000955,4.28e-24,68;UBERON:0006238,4.28e-24,68;UBERON:0003075,1.53e-23,82;UBERON:0007284,1.53e-23,82;UBERON:0002346,2.71e-22,86;UBERON:0010371,7.78e-19,104;UBERON:0003528,8.02e-19,34;UBERON:0002020,8.02e-19,34;UBERON:0001893,1.17e-18,34;UBERON:0004121,4.72e-18,171;UBERON:0000924,4.72e-18,171;UBERON:0006601,4.72e-18,171;UBERON:0002791,3.07e-17,32;UBERON:0001869,4.23e-17,32;UBERON:0003056,6.18e-17,61;UBERON:0011216,9.88e-17,223;UBERON:0002619,2.63e-14,22;UBERON:0010314,2.44e-13,132;UBERON:0001950,5.85e-13,20;UBERON:0000956,1.87e-12,25;UBERON:0000203,1.87e-12,25;UBERON:0003076,1.83e-08,15;UBERON:0003057,1.83e-08,15;UBERON:0000125,3.98e-08,9;UBERON:0002308,3.98e-08,9;UBERON:0001894,1.06e-07,7;UBERON:0006222,1.06e-07,7;UBERON:0004732,8.56e-07,13 | |||
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| ||
|short_description=p4@MSL2 | |||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p4@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491050_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | C9J5S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.18e-10 | 18 |
alpha-beta T cell | 3.18e-10 | 18 |
immature T cell | 3.18e-10 | 18 |
mature T cell | 3.18e-10 | 18 |
immature alpha-beta T cell | 3.18e-10 | 18 |
T cell | 1.12e-08 | 25 |
pro-T cell | 1.12e-08 | 25 |
CD8-positive, alpha-beta T cell | 2.61e-08 | 11 |