FFCP PHASE1:Hg19::chr11:8892907..8892925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRS6,E9PM32,E9PLD7,E9PPS6,Q6ZTJ7 | |UniProt=E9PRS6,E9PM32,E9PLD7,E9PPS6,Q6ZTJ7 | ||
|association_with_transcript=0bp_to_ENST00000524757,ENST00000525169,ENST00000527392,ENST00000534665,uc001mgw.1_5end | |association_with_transcript=0bp_to_ENST00000524757,ENST00000525169,ENST00000527392,ENST00000534665,uc001mgw.1_5end | ||
|cluster_id=chr11:8892907..8892925,- | |||
|description=CAGE_peak_2_at_ST5_5end | |description=CAGE_peak_2_at_ST5_5end | ||
|id=chr11:8892907..8892925,- | |id=chr11:8892907..8892925,- | ||
|ontology_enrichment_celltype=CL:0000055!3.84e-25!180;CL:0000183!9.14e-10!59;CL:0000057!1.13e-09!75;CL:0000220!1.41e-09!246;CL:0002321!2.68e-09!248;CL:0000333!4.57e-09!41;CL:0000187!1.02e-08!54;CL:0000680!1.93e-08!57;CL:0000056!1.93e-08!57;CL:0000355!1.93e-08!57;CL:0000133!2.40e-08!59;CL:0000221!4.30e-08!71;CL:0000393!3.37e-07!60;CL:0000211!3.37e-07!60 | |ontology_enrichment_celltype=CL:0000055!3.84e-25!180;CL:0000183!9.14e-10!59;CL:0000057!1.13e-09!75;CL:0000220!1.41e-09!246;CL:0002321!2.68e-09!248;CL:0000333!4.57e-09!41;CL:0000187!1.02e-08!54;CL:0000680!1.93e-08!57;CL:0000056!1.93e-08!57;CL:0000355!1.93e-08!57;CL:0000133!2.40e-08!59;CL:0000221!4.30e-08!71;CL:0000393!3.37e-07!60;CL:0000211!3.37e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.56e-07;19 | |ontology_enrichment_celltype_v019=CL:0000349;4.56e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.14e-10,76;CL:0000187,6.52e-09,55;CL:0000680,1.24e-08,58;CL:0000056,1.24e-08,58;CL:0000355,1.24e-08,58;CL:0000333,1.44e-08,41;CL:0000133,6.45e-08,59;CL:0000221,9.15e-08,72;CL:0000393,2.27e-07,61;CL:0000211,2.27e-07,61;CL:0002321,2.76e-07,250;CL:0000349,4.30e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.91e-22!365;UBERON:0000481!3.59e-19!347;UBERON:0000468!2.01e-17!659;UBERON:0000467!3.57e-15!625;UBERON:0000480!7.15e-15!626;UBERON:0005256!1.61e-13!143;UBERON:0000119!4.22e-12!312;UBERON:0000483!1.66e-11!309;UBERON:0000914!8.83e-11!83;UBERON:0002329!8.83e-11!83;UBERON:0003077!8.83e-11!83;UBERON:0003059!8.83e-11!83;UBERON:0007282!8.83e-11!83;UBERON:0009618!8.83e-11!83;UBERON:0007285!8.83e-11!83;UBERON:0003104!1.01e-10!238;UBERON:0009142!1.01e-10!238;UBERON:0002100!2.06e-10!216;UBERON:0000486!3.74e-10!82;UBERON:0000924!4.06e-10!173;UBERON:0006601!4.06e-10!173;UBERON:0002050!4.09e-10!605;UBERON:0005423!4.09e-10!605;UBERON:0000923!5.03e-10!604;UBERON:0005291!5.03e-10!604;UBERON:0006598!5.03e-10!604;UBERON:0002532!5.03e-10!604;UBERON:0000922!6.77e-10!612;UBERON:0004121!7.14e-10!169;UBERON:0000062!1.13e-09!511;UBERON:0004290!1.79e-09!70;UBERON:0000064!2.26e-09!219;UBERON:0002385!6.55e-09!63;UBERON:0001015!6.55e-09!63;UBERON:0000383!6.55e-09!63;UBERON:0001134!1.02e-08!61;UBERON:0002036!1.02e-08!61;UBERON:0003082!1.02e-08!61;UBERON:0000477!1.74e-08!286;UBERON:0004923!1.93e-07!57;UBERON:0003102!8.19e-07!95;UBERON:0000033!9.05e-07!123 | |ontology_enrichment_uberon=UBERON:0000475!6.91e-22!365;UBERON:0000481!3.59e-19!347;UBERON:0000468!2.01e-17!659;UBERON:0000467!3.57e-15!625;UBERON:0000480!7.15e-15!626;UBERON:0005256!1.61e-13!143;UBERON:0000119!4.22e-12!312;UBERON:0000483!1.66e-11!309;UBERON:0000914!8.83e-11!83;UBERON:0002329!8.83e-11!83;UBERON:0003077!8.83e-11!83;UBERON:0003059!8.83e-11!83;UBERON:0007282!8.83e-11!83;UBERON:0009618!8.83e-11!83;UBERON:0007285!8.83e-11!83;UBERON:0003104!1.01e-10!238;UBERON:0009142!1.01e-10!238;UBERON:0002100!2.06e-10!216;UBERON:0000486!3.74e-10!82;UBERON:0000924!4.06e-10!173;UBERON:0006601!4.06e-10!173;UBERON:0002050!4.09e-10!605;UBERON:0005423!4.09e-10!605;UBERON:0000923!5.03e-10!604;UBERON:0005291!5.03e-10!604;UBERON:0006598!5.03e-10!604;UBERON:0002532!5.03e-10!604;UBERON:0000922!6.77e-10!612;UBERON:0004121!7.14e-10!169;UBERON:0000062!1.13e-09!511;UBERON:0004290!1.79e-09!70;UBERON:0000064!2.26e-09!219;UBERON:0002385!6.55e-09!63;UBERON:0001015!6.55e-09!63;UBERON:0000383!6.55e-09!63;UBERON:0001134!1.02e-08!61;UBERON:0002036!1.02e-08!61;UBERON:0003082!1.02e-08!61;UBERON:0000477!1.74e-08!286;UBERON:0004923!1.93e-07!57;UBERON:0003102!8.19e-07!95;UBERON:0000033!9.05e-07!123 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p2@ST5 | |short_description=p2@ST5 | ||
}} | }} |
Latest revision as of 00:10, 25 September 2015
Short description: | p2@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ST5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524757, ENST00000525169, ENST00000527392, ENST00000534665, uc001mgw.1_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PRS6E9PM32E9PLD7E9PPS6Q6ZTJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.14e-10 | 76 |
muscle cell | 6.52e-09 | 55 |
muscle precursor cell | 1.24e-08 | 58 |
myoblast | 1.24e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-08 | 58 |
migratory neural crest cell | 1.44e-08 | 41 |
neurectodermal cell | 6.45e-08 | 59 |
ectodermal cell | 9.15e-08 | 72 |
electrically responsive cell | 2.27e-07 | 61 |
electrically active cell | 2.27e-07 | 61 |
embryonic cell | 2.76e-07 | 250 |
extraembryonic cell | 4.30e-07 | 19 |