FFCP PHASE1:Hg19::chr9:12708011..12708027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=340bp_to_ENST00000473504_5end | |association_with_transcript=340bp_to_ENST00000473504_5end | ||
|cluster_id=chr9:12708011..12708027,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_27_at_TYRP1_5end | |description=CAGE_peak_27_at_TYRP1_5end | ||
|id=chr9:12708011..12708027,+ | |id=chr9:12708011..12708027,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.62e-84!10;CL:0000541!1.62e-84!10;CL:0000147!3.01e-60!14;CL:0000710!5.05e-42!20;CL:0002567!7.60e-41!3;CL:0000075!5.56e-31!27;CL:0002077!3.09e-25!33;CL:0000325!2.97e-21!39;CL:0000333!3.26e-19!41;CL:0002566!1.23e-14!1;CL:0002568!2.11e-14!1;CL:0000133!2.49e-13!59;CL:0000221!5.17e-11!71 | |ontology_enrichment_celltype=CL:0000148!1.62e-84!10;CL:0000541!1.62e-84!10;CL:0000147!3.01e-60!14;CL:0000710!5.05e-42!20;CL:0002567!7.60e-41!3;CL:0000075!5.56e-31!27;CL:0002077!3.09e-25!33;CL:0000325!2.97e-21!39;CL:0000333!3.26e-19!41;CL:0002566!1.23e-14!1;CL:0002568!2.11e-14!1;CL:0000133!2.49e-13!59;CL:0000221!5.17e-11!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.24e-120;10!CL:0000147;6.25e-86;14!CL:0002567;5.15e-74;3!CL:0000710;2.78e-60;20!CL:0000075;9.55e-45;27!CL:0002077;2.60e-31;34!CL:0002566;9.79e-26;1!CL:0000149;1.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.24e-120,10;CL:0000541,4.24e-120,10;CL:0000147,6.25e-86,14;CL:0002567,3.54e-74,3;CL:0000710,2.79e-60,20;CL:0000075,9.55e-45,27;CL:0002077,1.35e-35,34;CL:0000333,3.38e-28,41;CL:0002566,1.26e-25,1;CL:0000133,6.28e-20,59;CL:0000221,1.90e-16,72;CL:0000149,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;9.18e-11;59!CL:0000221;4.75e-09;72 | |||
|ontology_enrichment_disease=DOID:3112!1.84e-14!1;DOID:3371!2.75e-14!1;DOID:4549!2.75e-14!1;DOID:5861!2.75e-14!1;DOID:6496!2.75e-14!1;DOID:1909!5.37e-08!2 | |ontology_enrichment_disease=DOID:3112!1.84e-14!1;DOID:3371!2.75e-14!1;DOID:4549!2.75e-14!1;DOID:5861!2.75e-14!1;DOID:6496!2.75e-14!1;DOID:1909!5.37e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.37e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.37e-13,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p27@TYRP1 | |short_description=p27@TYRP1 | ||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p27@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 340bp_to_ENST00000473504_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.24e-120 | 10 |
melanoblast | 4.24e-120 | 10 |
pigment cell | 6.25e-86 | 14 |
light melanocyte | 3.54e-74 | 3 |
neurecto-epithelial cell | 2.79e-60 | 20 |
columnar/cuboidal epithelial cell | 9.55e-45 | 27 |
ecto-epithelial cell | 1.35e-35 | 34 |
migratory neural crest cell | 3.38e-28 | 41 |
dark melanocyte | 1.26e-25 | 1 |
neurectodermal cell | 6.28e-20 | 59 |
ectodermal cell | 1.90e-16 | 72 |
visual pigment cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.37e-13 | 2 |