FFCP PHASE1:Hg19::chr2:224702740..224702761,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:224702740..224702761,-
|short_description=p7@AP1S3
|description=CAGE_peak_7_at_AP1S3_5end
|association_with_transcript=0bp_to_ENST00000444408_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130340 | |EntrezGene=130340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18971 | |HGNC=18971 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZK4 | |UniProt=C9JZK4 | ||
|association_with_transcript=0bp_to_ENST00000444408_5end | |||
|cluster_id=chr2:224702740..224702761,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_7_at_AP1S3_5end | |||
|id=chr2:224702740..224702761,- | |||
|ontology_enrichment_celltype=CL:0000066!2.42e-20!254;CL:0000163!2.93e-08!9;CL:0000223!1.63e-07!59;CL:0002076!3.15e-07!43;CL:0002274!3.56e-07!5;CL:0000457!3.56e-07!5;CL:0002191!3.56e-07!5;CL:0000097!3.56e-07!5;CL:0000831!3.56e-07!5;CL:0002028!3.56e-07!5;CL:1000507!5.21e-07!12;CL:1000494!5.21e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.38e-28;5!CL:0000163;3.34e-16;9!CL:0000047;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.32e-28,5;CL:0002028,1.32e-28,5;CL:0000163,3.25e-16,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.46e-31;2!UBERON:0005754;1.65e-16;1 | |||
|ontology_enrichment_disease=DOID:305!5.32e-15!106;DOID:0050687!6.70e-11!143;DOID:162!2.41e-10!235;DOID:14566!1.12e-09!239;DOID:1749!6.87e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!4.39e-08!26;UBERON:0006554!1.86e-07!44;UBERON:0002113!2.76e-07!27;UBERON:0003918!2.76e-07!27;UBERON:0005095!2.76e-07!27;UBERON:0007687!2.76e-07!27;UBERON:0001008!3.79e-07!45;UBERON:0004119!4.59e-07!169;UBERON:0000925!4.59e-07!169;UBERON:0006595!4.59e-07!169;UBERON:0009773!5.21e-07!12;UBERON:0001231!5.21e-07!12;UBERON:0004810!5.21e-07!12;UBERON:0005911!8.10e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.63e-21;3!UBERON:0004054;3.63e-21;3!UBERON:0000998;1.65e-16;1!UBERON:0001301;1.65e-16;1!UBERON:0006868;1.65e-16;1!UBERON:0005904;3.87e-16;4!UBERON:0000058;5.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.02e-21,3;UBERON:0004054,4.02e-21,3;UBERON:0000998,1.21e-16,1;UBERON:0006868,1.21e-16,1;UBERON:0001301,2.63e-16,1;UBERON:0005904,4.18e-16,4;UBERON:0000080,1.13e-07,9;UBERON:0002120,1.13e-07,9;UBERON:0004875,1.13e-07,9;UBERON:0005721,1.13e-07,9;UBERON:0005754,1.13e-07,9;UBERON:0007297,1.13e-07,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.661743720148475,0.221729397462564,0.527008714158756,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0,0,1.15424147083917,0,0,0,0,0,0,0,0,0.491953754172454,0.514703430895577,0.439001141634502,0,0.201057944823262,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0.492663237895943,0.44024217006613,4.56121854189699,4.61183850934277,5.6809095041871,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,1.3996218765488,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.184161977871793,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.844413031143006,0,0,0,0,0.541892875087706,0.501689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,1.96808787419823,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0.577076851905779,0,0,0,0,0,0.649243880549111,0.842391534340376,0,0,5.01268954180134,0,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0.671028323677248,0.667396566847634,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.227586896570999,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0.163232808159148,0.565412285735763,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.69647365264322,1.04836000945218,0,0.19351266257817,0.584714536689484,0.492692742319255,0,0.264768380074501,0,0,0,0,0.195551382734803,0.320635281006135,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,1.02652102730598,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0.428883182749851,0,0,0.231522474323834,0,0,0.617602894321944,0.438568099157414,0.353378291891762,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0.739280431085226,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0.667388411352415,0.313972371402056,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0.22910686854405,0,0,0,1.27595303699816,0.487671699929078,0,0,0,0,0,0,0,0,0,0.452888530700021,0.463044948647668,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0.193373663920732,0,0,0.352894871715692,0.962896400270019,0.730336388246517,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0,0.43033323235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| ||
|short_description=p7@AP1S3 | |||
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Latest revision as of 00:28, 25 September 2015
Short description: | p7@AP1S3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AP1S3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000444408_5end |
EntrezGene: | AP1S3 |
HGNC: | 18971 |
UniProt: | C9JZK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.32e-28 | 5 |
basophil mast progenitor cell | 1.32e-28 | 5 |
endocrine cell | 3.25e-16 | 9 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.02e-21 | 3 |
internal male genitalia | 4.02e-21 | 3 |
seminal vesicle | 1.21e-16 | 1 |
seminal fluid secreting gland | 1.21e-16 | 1 |
epididymis | 2.63e-16 | 1 |
duct of male reproductive system | 4.18e-16 | 4 |
mesonephros | 1.13e-07 | 9 |
pronephros | 1.13e-07 | 9 |
nephrogenic cord | 1.13e-07 | 9 |
pronephric mesoderm | 1.13e-07 | 9 |
rostral part of nephrogenic cord | 1.13e-07 | 9 |
presumptive pronephric mesoderm | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.94e-09 | 2 |