FFCP PHASE1:Hg19::chr19:10397621..10397642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3386 | |EntrezGene=3386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5347 | |HGNC=5347 | ||
|TSSclassifier=strong | |||
|UniProt=Q14773,Q9BWR0 | |UniProt=Q14773,Q9BWR0 | ||
|association_with_transcript=0bp_to_NM_001039132,NM_001544,NM_022377_5end | |association_with_transcript=0bp_to_NM_001039132,NM_001544,NM_022377_5end | ||
|cluster_id=chr19:10397621..10397642,+ | |||
|description=CAGE_peak_1_at_ICAM4_5end | |description=CAGE_peak_1_at_ICAM4_5end | ||
|id=chr19:10397621..10397642,+ | |id=chr19:10397621..10397642,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.16e-30!112;CL:0000049!2.16e-30!112;CL:0000037!2.09e-24!172;CL:0000566!2.09e-24!172;CL:0000988!2.01e-23!182;CL:0002032!1.44e-22!165;CL:0000837!1.44e-22!165;CL:0000839!1.16e-18!70;CL:0000557!1.15e-16!71;CL:0000766!3.85e-16!76;CL:0002194!3.67e-15!63;CL:0000576!3.67e-15!63;CL:0000040!3.67e-15!63;CL:0000559!3.67e-15!63;CL:0002009!1.08e-14!65;CL:0002057!1.83e-13!42;CL:0000738!7.03e-13!140;CL:0002031!8.68e-12!124;CL:0000860!1.88e-11!45;CL:0002087!2.36e-10!119;CL:0000034!5.61e-08!444;CL:0000134!9.78e-07!358 | |ontology_enrichment_celltype=CL:0000763!2.16e-30!112;CL:0000049!2.16e-30!112;CL:0000037!2.09e-24!172;CL:0000566!2.09e-24!172;CL:0000988!2.01e-23!182;CL:0002032!1.44e-22!165;CL:0000837!1.44e-22!165;CL:0000839!1.16e-18!70;CL:0000557!1.15e-16!71;CL:0000766!3.85e-16!76;CL:0002194!3.67e-15!63;CL:0000576!3.67e-15!63;CL:0000040!3.67e-15!63;CL:0000559!3.67e-15!63;CL:0002009!1.08e-14!65;CL:0002057!1.83e-13!42;CL:0000738!7.03e-13!140;CL:0002031!8.68e-12!124;CL:0000860!1.88e-11!45;CL:0002087!2.36e-10!119;CL:0000034!5.61e-08!444;CL:0000134!9.78e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000763;9.78e-14;100!CL:0000766;1.48e-12;69!CL:0000576;3.17e-11;48!CL:0000473;4.17e-11;39!CL:0000234;4.17e-11;39!CL:0000860;4.97e-09;33!CL:0002057;4.97e-09;33!CL:0000451;7.96e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.46e-49,108;CL:0000049,1.46e-49,108;CL:0000037,7.10e-34,168;CL:0002032,5.89e-32,161;CL:0000837,5.89e-32,161;CL:0000988,1.24e-31,177;CL:0000839,2.29e-28,66;CL:0000766,3.93e-26,72;CL:0000557,5.71e-25,67;CL:0002194,3.97e-23,59;CL:0000576,3.97e-23,59;CL:0000040,3.97e-23,59;CL:0000559,3.97e-23,59;CL:0002009,6.02e-22,61;CL:0000473,1.02e-21,48;CL:0000234,1.02e-21,48;CL:0000860,2.71e-17,42;CL:0002057,2.71e-17,42;CL:0000738,4.16e-16,136;CL:0002031,3.86e-14,120;CL:0002087,9.48e-12,115;CL:0002393,6.83e-10,9;CL:0002397,6.83e-10,9;CL:0000134,1.36e-07,354;CL:0002320,2.42e-07,361;CL:0000219,2.59e-07,386;CL:0000451,6.59e-07,10;CL:0000990,8.83e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000049;1.45e-14;108!CL:0002057;5.30e-14;42 | |||
|ontology_enrichment_disease=DOID:8692!6.81e-13!31;DOID:1240!7.87e-12!39;DOID:2531!2.01e-08!51;DOID:0060083!2.01e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.22e-18;31!DOID:1240;1.13e-13;39!DOID:2531;1.35e-08;51!DOID:0060083;1.35e-08;51!DOID:1036;3.00e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.98e-19,31;DOID:1240,9.67e-18,39;DOID:2531,1.63e-11,51;DOID:0060083,1.63e-11,51;DOID:1036,3.54e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.69e-17!102;UBERON:0003061!1.69e-17!102;UBERON:0002193!1.82e-16!112;UBERON:0002371!2.06e-13!80;UBERON:0002405!1.97e-11!115;UBERON:0001474!2.54e-11!86;UBERON:0003081!1.31e-07!216;UBERON:0002384!5.68e-07!375;UBERON:0004765!7.80e-07!101;UBERON:0001434!7.80e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.65e-21,76;UBERON:0002390,2.28e-20,98;UBERON:0003061,2.28e-20,98;UBERON:0001474,6.91e-19,82;UBERON:0002193,6.89e-18,108;UBERON:0004765,5.70e-16,90;UBERON:0002405,6.63e-16,93;UBERON:0001434,4.90e-13,100;UBERON:0002384,1.11e-07,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.458480434487708,0.328402357799783,0.314843125254717,4.72037132218685,1.15148819429164,2.32224184974114,0.919421224478927,1.204823675113,3.69754010166788,0.0774672005803016,0,2.34880351467878,0,3.20871115952227,2.82114131930607,2.23915474239924,2.26725566213286,0.515151135268373,1.45398238779565,2.26725566213286,0.485168122375632,1.85943229524548,2.46700732813095,0.619412741790207,2.01384674625505,2.0492856522328,0,1.37898272294647,1.93645405075148,0,2.63539275359647,2.45615535052061,0.224723484445085,0.918251677112708,3.85114832491312,0,2.96866170168044,2.39356389145958,0.426224750532694,2.61188314765726,2.26954089876456,0.622822248995575,1.50749199154046,2.60741459210101,1.3031330682307,0.605399502633369,4.41933163185078,0,11.4077854608449,5.95292039902122,3.14487968262564,6.73971786878971,6.15725260650176,0.64290234678832,32.4914527865023,26.0580847130808,25.5729815270488,0,0,1.77901850772711,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0,5.28685314316103,2.80254281490768,6.32121803460185,0,0.393010762749165,0.205601498999509,0.83593247695339,0,0,0,2.78526142212934,0,0.221533894583621,0,1.28091319725675,0.650296737799391,2.13769275984779,2.48715016007264,1.44901542867526,0,0,0,1.81294948316106,0.383220493601921,0.34362744548263,0,0.318565414324097,1.30216690771284,0,0.150575119077773,0.383959833463255,0,0.710331756132051,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0,0.392937226493138,1.45718115317017,1.48313777113772,4.54366351116557,2.61194605948901,2.79211717089617,6.67773748054957,0,3.71457501329565,0,0.860234595106124,0.694281003215189,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0,0,0,11.7745394078484,0.993943903390637,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.933633106199299,0.269421344139376,0.163461903113459,0.454072282934794,0.576175924479999,0.70296429550139,0.312160076830321,0.570471821544449,1.04614076386261,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0.910161361938026,2.15585442544872,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0,0,0,0.969876340912871,0.355009592516614,0,0.67824236924195,0,0,0,0.365921118388786,0.530119073285941,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,2.82873408649161,0,0.219500570817251,1.1240175325762,0,4.0738915869753,0.977424915930974,0,0,0,0,0,0,0,0,0,1.96973604869918,1.17002132569619,2.22946743433092,0,0,0,0.358234090811393,0.290633938513962,1.91691339582606,0.492663237895943,7.57216532513744,6.84182781284548,9.36779697210249,13.0029706429171,0,0,0,1.71072446022705,0,7.80891950394185,0,0.112131084345361,0,0,0.387815147273333,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0.266422179016099,1.28680194292333,3.7983512377401,4.93944202068461,0.325736184293735,0.355391948742546,2.37585561880029,0,0,0,4.86495122564762,1.50677127429638,2.10833939483032,0.239624855491583,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,1.17480694477644,0.686286847621712,3.92859249633486,1.50999940573032,0.853820462427555,0,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0,1.93375119346596,0,0,0.68888668898764,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0,0,0,0.541892875087706,0,0.509752546090077,0,0,1.53481913652154,2.61435451024901,0.256450125116389,0.328014645699706,0,0.515205058238611,0,0,0,0.650060246036521,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.712256285173899,0.991709492165869,2.30628080838127,3.1903178123646,2.4277867405332,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0,2.303080121802,0,0.636406495851874,0,1.2591072030832,1.64722217841633,1.7671860351853,0,0,0.421258456238981,3.90106991271672,0,1.05650146756755,0.818999468447914,1.1312434556297,0,0,0,0.876901770507525,2.31510213706675,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,1.14729081763241,0.982490410131212,0,0.709522128141196,0,0,0,0.349934720244983,2.50177493086331,4.69211592875051,2.17781969722645,0.753150406214233,1.29151611801369,0,5.32116184244011,2.06751060186264,3.55213326462519,3.0585488285695,2.27858874869665,0.714695326373367,0.822724546172388,1.94541993357815,0.540031437238115,0.79312517629427,0.961416640147258,0,0,0.185803175125719,2.16403819464667,0,7.65246109098347,0,4.40462351304443,7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|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.458480434487708,0.328402357799783,0.314843125254717,4.72037132218685,1.15148819429164,2.32224184974114,0.919421224478927,1.204823675113,3.69754010166788,0.0774672005803016,0,2.34880351467878,0,3.20871115952227,2.82114131930607,2.23915474239924,2.26725566213286,0.515151135268373,1.45398238779565,2.26725566213286,0.485168122375632,1.85943229524548,2.46700732813095,0.619412741790207,2.01384674625505,2.0492856522328,0,1.37898272294647,1.93645405075148,0,2.63539275359647,2.45615535052061,0.224723484445085,0.918251677112708,3.85114832491312,0,2.96866170168044,2.39356389145958,0.426224750532694,2.61188314765726,2.26954089876456,0.622822248995575,1.50749199154046,2.60741459210101,1.3031330682307,0.605399502633369,4.41933163185078,0,11.4077854608449,5.95292039902122,3.14487968262564,6.73971786878971,6.15725260650176,0.64290234678832,32.4914527865023,26.0580847130808,25.5729815270488,0,0,1.77901850772711,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0,5.28685314316103,2.80254281490768,6.32121803460185,0,0.393010762749165,0.205601498999509,0.83593247695339,0,0,0,2.78526142212934,0,0.221533894583621,0,1.28091319725675,0.650296737799391,2.13769275984779,2.48715016007264,1.44901542867526,0,0,0,1.81294948316106,0.383220493601921,0.34362744548263,0,0.318565414324097,1.30216690771284,0,0.150575119077773,0.383959833463255,0,0.710331756132051,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0,0.392937226493138,1.45718115317017,1.48313777113772,4.54366351116557,2.61194605948901,2.79211717089617,6.67773748054957,0,3.71457501329565,0,0.860234595106124,0.694281003215189,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0,0,0,11.7745394078484,0.993943903390637,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.933633106199299,0.269421344139376,0.163461903113459,0.454072282934794,0.576175924479999,0.70296429550139,0.312160076830321,0.570471821544449,1.04614076386261,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0.910161361938026,2.15585442544872,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0,0,0,0.969876340912871,0.355009592516614,0,0.67824236924195,0,0,0,0.365921118388786,0.530119073285941,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,2.82873408649161,0,0.219500570817251,1.1240175325762,0,4.0738915869753,0.977424915930974,0,0,0,0,0,0,0,0,0,1.96973604869918,1.17002132569619,2.22946743433092,0,0,0,0.358234090811393,0.290633938513962,1.91691339582606,0.492663237895943,7.57216532513744,6.84182781284548,9.36779697210249,13.0029706429171,0,0,0,1.71072446022705,0,7.80891950394185,0,0.112131084345361,0,0,0.387815147273333,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0.266422179016099,1.28680194292333,3.7983512377401,4.93944202068461,0.325736184293735,0.355391948742546,2.37585561880029,0,0,0,4.86495122564762,1.50677127429638,2.10833939483032,0.239624855491583,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,1.17480694477644,0.686286847621712,3.92859249633486,1.50999940573032,0.853820462427555,0,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0,1.93375119346596,0,0,0.68888668898764,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0,0,0,0.541892875087706,0,0.509752546090077,0,0,1.53481913652154,2.61435451024901,0.256450125116389,0.328014645699706,0,0.515205058238611,0,0,0,0.650060246036521,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.712256285173899,0.991709492165869,2.30628080838127,3.1903178123646,2.4277867405332,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0,2.303080121802,0,0.636406495851874,0,1.2591072030832,1.64722217841633,1.7671860351853,0,0,0.421258456238981,3.90106991271672,0,1.05650146756755,0.818999468447914,1.1312434556297,0,0,0,0.876901770507525,2.31510213706675,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,1.14729081763241,0.982490410131212,0,0.709522128141196,0,0,0,0.349934720244983,2.50177493086331,4.69211592875051,2.17781969722645,0.753150406214233,1.29151611801369,0,5.32116184244011,2.06751060186264,3.55213326462519,3.0585488285695,2.27858874869665,0.714695326373367,0.822724546172388,1.94541993357815,0.540031437238115,0.79312517629427,0.961416640147258,0,0,0.185803175125719,2.16403819464667,0,7.65246109098347,0,4.40462351304443,7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| ||
|short_description=p1@ICAM4 | |short_description=p1@ICAM4 | ||
}} | }} |
Latest revision as of 00:36, 25 September 2015
Short description: | p1@ICAM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ICAM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001039132, NM_001544, NM_022377_5end |
EntrezGene: | ICAM4 |
HGNC: | 5347 |
UniProt: | Q14773Q9BWR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.46e-49 | 108 |
common myeloid progenitor | 1.46e-49 | 108 |
hematopoietic stem cell | 7.10e-34 | 168 |
hematopoietic oligopotent progenitor cell | 5.89e-32 | 161 |
hematopoietic multipotent progenitor cell | 5.89e-32 | 161 |
hematopoietic cell | 1.24e-31 | 177 |
myeloid lineage restricted progenitor cell | 2.29e-28 | 66 |
myeloid leukocyte | 3.93e-26 | 72 |
granulocyte monocyte progenitor cell | 5.71e-25 | 67 |
monopoietic cell | 3.97e-23 | 59 |
monocyte | 3.97e-23 | 59 |
monoblast | 3.97e-23 | 59 |
promonocyte | 3.97e-23 | 59 |
macrophage dendritic cell progenitor | 6.02e-22 | 61 |
defensive cell | 1.02e-21 | 48 |
phagocyte | 1.02e-21 | 48 |
classical monocyte | 2.71e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-17 | 42 |
leukocyte | 4.16e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 3.86e-14 | 120 |
nongranular leukocyte | 9.48e-12 | 115 |
intermediate monocyte | 6.83e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.83e-10 | 9 |
mesenchymal cell | 1.36e-07 | 354 |
connective tissue cell | 2.42e-07 | 361 |
motile cell | 2.59e-07 | 386 |
dendritic cell | 6.59e-07 | 10 |
conventional dendritic cell | 8.83e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.65e-21 | 76 |
hematopoietic system | 2.28e-20 | 98 |
blood island | 2.28e-20 | 98 |
bone element | 6.91e-19 | 82 |
hemolymphoid system | 6.89e-18 | 108 |
skeletal element | 5.70e-16 | 90 |
immune system | 6.63e-16 | 93 |
skeletal system | 4.90e-13 | 100 |
connective tissue | 1.11e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.98e-19 | 31 |
leukemia | 9.67e-18 | 39 |
hematologic cancer | 1.63e-11 | 51 |
immune system cancer | 1.63e-11 | 51 |
chronic leukemia | 3.54e-07 | 8 |