FFCP PHASE1:Hg19::chr19:10397705..10397716,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:10397705..10397716,+
|short_description=p5@ICAM4
|description=CAGE_peak_5_at_ICAM4_5end
|association_with_transcript=16bp_to_BT009816_5end
|EntrezGene=33...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3386 | |EntrezGene=3386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5347 | |HGNC=5347 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWR0 | |UniProt=Q9BWR0 | ||
|association_with_transcript=16bp_to_BT009816_5end | |||
|cluster_id=chr19:10397705..10397716,+ | |||
|description=CAGE_peak_5_at_ICAM4_5end | |||
|id=chr19:10397705..10397716,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.20e-13!112;CL:0000049!5.20e-13!112;CL:0000875!7.26e-12!3;CL:0002396!7.26e-12!3;CL:0002393!4.93e-10!9;CL:0002397!4.93e-10!9;CL:0000764!4.78e-09!2;CL:0000765!4.78e-09!2;CL:0000050!4.78e-09!2;CL:0000038!4.78e-09!2;CL:0000558!4.78e-09!2;CL:0000547!4.78e-09!2;CL:0000549!4.78e-09!2;CL:0000550!4.78e-09!2;CL:0000552!4.78e-09!2;CL:0000037!6.35e-09!172;CL:0000566!6.35e-09!172;CL:0000988!4.24e-08!182;CL:0002032!7.62e-08!165;CL:0000837!7.62e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.57e-27;2!CL:0000558;3.57e-27;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.22e-27,2;CL:0000765,1.22e-27,2;CL:0000050,1.22e-27,2;CL:0000038,1.22e-27,2;CL:0000558,1.22e-27,2;CL:0000547,1.22e-27,2;CL:0000549,1.22e-27,2;CL:0000550,1.22e-27,2;CL:0000552,1.22e-27,2;CL:0000763,5.91e-09,108;CL:0000049,5.91e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.43e-21!31;DOID:1036!1.11e-16!8;DOID:1240!5.48e-16!39;DOID:2531!1.91e-11!51;DOID:0060083!1.91e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.72e-20;31!DOID:8552;7.12e-15;1!DOID:9119;1.72e-14;1!DOID:1240;6.00e-13;39!DOID:2531;8.21e-11;51!DOID:0060083;8.21e-11;51!DOID:1036;1.38e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.55e-20,31;DOID:1240,3.16e-16,39;DOID:8552,7.13e-15,1;DOID:9119,1.41e-14,1;DOID:2531,2.75e-12,51;DOID:0060083,2.75e-12,51;DOID:1036,1.40e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.84e-11!15;UBERON:0000179!2.84e-11!15;UBERON:0000463!2.84e-11!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@ICAM4 | |||
}} | }} |
Latest revision as of 00:37, 25 September 2015
Short description: | p5@ICAM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ICAM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_BT009816_5end |
EntrezGene: | ICAM4 |
HGNC: | 5347 |
UniProt: | Q9BWR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.22e-27 | 2 |
erythroblast | 1.22e-27 | 2 |
megakaryocyte-erythroid progenitor cell | 1.22e-27 | 2 |
erythroid progenitor cell | 1.22e-27 | 2 |
reticulocyte | 1.22e-27 | 2 |
proerythroblast | 1.22e-27 | 2 |
basophilic erythroblast | 1.22e-27 | 2 |
polychromatophilic erythroblast | 1.22e-27 | 2 |
orthochromatic erythroblast | 1.22e-27 | 2 |
myeloid cell | 5.91e-09 | 108 |
common myeloid progenitor | 5.91e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.55e-20 | 31 |
leukemia | 3.16e-16 | 39 |
chronic myeloid leukemia | 7.13e-15 | 1 |
acute myeloid leukemia | 1.41e-14 | 1 |
hematologic cancer | 2.75e-12 | 51 |
immune system cancer | 2.75e-12 | 51 |
chronic leukemia | 1.40e-07 | 8 |