FFCP PHASE1:Hg19::chr19:1041187..1041206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10347 | |EntrezGene=10347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37 | |HGNC=37 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKG5 | |UniProt=E9PKG5 | ||
|association_with_transcript=0bp_to_ENST00000527496,ENST00000531467_5end | |association_with_transcript=0bp_to_ENST00000527496,ENST00000531467_5end | ||
|cluster_id=chr19:1041187..1041206,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_ABCA7_5end | |description=CAGE_peak_4_at_ABCA7_5end | ||
|id=chr19:1041187..1041206,+ | |id=chr19:1041187..1041206,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.48e-09;1!CL:0000222;1.48e-09;1!CL:0002372;1.48e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.15e-09,1;CL:0002372,1.15e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.12e-13!94;UBERON:0001016!9.12e-13!94;UBERON:0005743!9.56e-13!86;UBERON:0001017!2.84e-12!82;UBERON:0000955!1.21e-11!69;UBERON:0006238!1.21e-11!69;UBERON:0001049!1.25e-11!57;UBERON:0005068!1.25e-11!57;UBERON:0006241!1.25e-11!57;UBERON:0007135!1.25e-11!57;UBERON:0000153!2.08e-11!129;UBERON:0007811!2.08e-11!129;UBERON:0007023!3.58e-11!115;UBERON:0000033!4.23e-11!123;UBERON:0002616!1.02e-10!59;UBERON:0004121!1.87e-10!169;UBERON:0003075!9.59e-10!86;UBERON:0007284!9.59e-10!86;UBERON:0000924!1.06e-09!173;UBERON:0006601!1.06e-09!173;UBERON:0002346!1.11e-08!90;UBERON:0003080!2.65e-08!42;UBERON:0002780!9.96e-08!41;UBERON:0001890!9.96e-08!41;UBERON:0006240!9.96e-08!41;UBERON:0003056!2.70e-07!61 | |ontology_enrichment_uberon=UBERON:0000073!9.12e-13!94;UBERON:0001016!9.12e-13!94;UBERON:0005743!9.56e-13!86;UBERON:0001017!2.84e-12!82;UBERON:0000955!1.21e-11!69;UBERON:0006238!1.21e-11!69;UBERON:0001049!1.25e-11!57;UBERON:0005068!1.25e-11!57;UBERON:0006241!1.25e-11!57;UBERON:0007135!1.25e-11!57;UBERON:0000153!2.08e-11!129;UBERON:0007811!2.08e-11!129;UBERON:0007023!3.58e-11!115;UBERON:0000033!4.23e-11!123;UBERON:0002616!1.02e-10!59;UBERON:0004121!1.87e-10!169;UBERON:0003075!9.59e-10!86;UBERON:0007284!9.59e-10!86;UBERON:0000924!1.06e-09!173;UBERON:0006601!1.06e-09!173;UBERON:0002346!1.11e-08!90;UBERON:0003080!2.65e-08!42;UBERON:0002780!9.96e-08!41;UBERON:0001890!9.96e-08!41;UBERON:0006240!9.96e-08!41;UBERON:0003056!2.70e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.87e-20;4!UBERON:0010133;6.87e-20;4!UBERON:0001905;1.58e-18;2!UBERON:0002757;1.58e-18;2!UBERON:0010134;1.58e-18;2!UBERON:0005408;1.58e-18;2!UBERON:0001899;1.58e-18;2!UBERON:0001894;1.31e-11;7!UBERON:0007195;6.30e-10;1!UBERON:0002784;1.01e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,8.88e-20,4;UBERON:0010133,8.88e-20,4;UBERON:0001905,1.59e-18,2;UBERON:0002757,1.59e-18,2;UBERON:0010134,1.59e-18,2;UBERON:0005408,1.59e-18,2;UBERON:0001899,1.59e-18,2;UBERON:0001894,1.51e-11,7;UBERON:0006222,1.51e-11,7;UBERON:0007195,7.50e-10,1;UBERON:0002784,1.01e-09,4 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.650296737799391,0,0.276350017785848,1.15921234294021,0.296573126324121,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.196468613246569,0.364295288292542,0,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0,0,0,0.309977343527296,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0.103052529238439,0.772921620136887,0.18611685633159,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.603173834469785,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.264145302039678,0,0,0.25248486685276,0.253991577168676,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,1.56640925970192,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0.294747123039363,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,2.29391162142713,1.13929437434833,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.439524537815682,0.121360521749513,0.222886768554957,0,0,0,0,0,0.281338832821026,0.445234820091624,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,2.22273980289274,1.93866549219044,0.556608588971108,0,0,0,0.724999575434793,0,0,0.709163045303809,0.344743373241465,0,0,0.885741385813839,0.241192877250816,0,2.54332297841817,0.886642856860642,0,0.871507708151921,0.139423744278603,0,0,0.69169171316418,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.269604531922708,0.802577647298789,0,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.0882561266915003,4.29363407483012,0,0.19871461170299,0.50648636764703,0,0.721429382263803,0,0,0,0,0,0.288109595976299,0.248505071130865,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0.415440338029185,0,0,0.364497339948148,0,0,0.0524545881349981,0.105600336519406,1.97216073266129,0,0,0,0.25426853765475,0,0,0.653174720218818,0,0,2.89659637035217,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0.488105059607853,0.876336514945499,0,0.221858103073705,0.248385611765534,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.553033744606923,0.584580926518165,0.132864840313363,0.490696182767533,0,0,0,0,0.106691729694141,0.172214979660816,0,0.7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| ||
|short_description=p4@ABCA7 | |short_description=p4@ABCA7 | ||
}} | }} |
Latest revision as of 00:49, 25 September 2015
Short description: | p4@ABCA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABCA7_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000527496, ENST00000531467_5end |
EntrezGene: | ABCA7 |
HGNC: | 37 |
UniProt: | E9PKG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.15e-09 | 1 |
myotube | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 8.88e-20 | 4 |
neuroendocrine gland | 8.88e-20 | 4 |
pineal body | 1.59e-18 | 2 |
regional part of epithalamus | 1.59e-18 | 2 |
secretory circumventricular organ | 1.59e-18 | 2 |
circumventricular organ | 1.59e-18 | 2 |
epithalamus | 1.59e-18 | 2 |
diencephalon | 1.51e-11 | 7 |
future diencephalon | 1.51e-11 | 7 |
stroma of bone marrow | 7.50e-10 | 1 |
regional part of diencephalon | 1.01e-09 | 4 |