FFCP PHASE1:Hg19::chr14:64663679..64663688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23224 | |EntrezGene=23224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17084 | |HGNC=17084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=177bp_to_ENST00000553801_5end | |association_with_transcript=177bp_to_ENST00000553801_5end | ||
|cluster_id=chr14:64663679..64663688,+ | |||
|description=CAGE_peak_33_at_SYNE2_5end | |description=CAGE_peak_33_at_SYNE2_5end | ||
|id=chr14:64663679..64663688,+ | |id=chr14:64663679..64663688,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.04e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!4.72e-32!59;UBERON:0001049!1.43e-30!57;UBERON:0005068!1.43e-30!57;UBERON:0006241!1.43e-30!57;UBERON:0007135!1.43e-30!57;UBERON:0002780!4.16e-30!41;UBERON:0001890!4.16e-30!41;UBERON:0006240!4.16e-30!41;UBERON:0003080!2.75e-29!42;UBERON:0000955!4.38e-26!69;UBERON:0006238!4.38e-26!69;UBERON:0007023!1.10e-24!115;UBERON:0002619!2.98e-24!22;UBERON:0001893!8.87e-23!34;UBERON:0001950!1.39e-22!20;UBERON:0003075!5.73e-22!86;UBERON:0007284!5.73e-22!86;UBERON:0005743!1.34e-21!86;UBERON:0001869!1.99e-21!32;UBERON:0000956!4.21e-21!25;UBERON:0000203!4.21e-21!25;UBERON:0001017!4.64e-21!82;UBERON:0003056!8.57e-21!61;UBERON:0002346!1.03e-20!90;UBERON:0000073!1.11e-20!94;UBERON:0001016!1.11e-20!94;UBERON:0002791!1.28e-20!33;UBERON:0002020!2.42e-17!34;UBERON:0003528!2.42e-17!34;UBERON:0000153!3.04e-16!129;UBERON:0007811!3.04e-16!129;UBERON:0000200!2.25e-15!6;UBERON:0000033!1.22e-14!123;UBERON:0002771!1.09e-11!3;UBERON:0001871!2.24e-11!7;UBERON:0004121!9.84e-11!169;UBERON:0000924!2.46e-10!173;UBERON:0006601!2.46e-10!173;UBERON:0001894!4.28e-09!7;UBERON:0006222!4.28e-09!7;UBERON:0000025!7.75e-09!194;UBERON:0001870!2.61e-08!2;UBERON:0000477!5.68e-08!286;UBERON:0002021!2.75e-07!5;UBERON:0004111!3.59e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.52e-50;2!UBERON:0003296;6.30e-26;4!UBERON:0010133;6.30e-26;4!UBERON:0002037;8.34e-18;6!UBERON:0001894;1.78e-15;7!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13!UBERON:0000073;4.62e-08;53!UBERON:0002616;4.62e-08;53!UBERON:0001017;1.07e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p33@SYNE2 | |short_description=p33@SYNE2 | ||
}} | }} |
Latest revision as of 01:03, 25 September 2015
Short description: | p33@SYNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SYNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 177bp_to_ENST00000553801_5end |
EntrezGene: | SYNE2 |
HGNC: | 17084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |