FFCP PHASE1:Hg19::chr14:64663724..64663774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23224 | |EntrezGene=23224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17084 | |HGNC=17084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=222bp_to_ENST00000553801_5end | |association_with_transcript=222bp_to_ENST00000553801_5end | ||
|cluster_id=chr14:64663724..64663774,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_3_at_SYNE2_5end | |description=CAGE_peak_3_at_SYNE2_5end | ||
|id=chr14:64663724..64663774,+ | |id=chr14:64663724..64663774,+ | ||
|ontology_enrichment_celltype=CL:0000236!8.03e-07!14 | |ontology_enrichment_celltype=CL:0000236!8.03e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.14e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.30e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.93e-17;82!UBERON:0006215;2.44e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.72e-50!115;UBERON:0001049!9.36e-39!57;UBERON:0005068!9.36e-39!57;UBERON:0006241!9.36e-39!57;UBERON:0007135!9.36e-39!57;UBERON:0001017!6.93e-37!82;UBERON:0005743!2.08e-35!86;UBERON:0000073!3.26e-35!94;UBERON:0001016!3.26e-35!94;UBERON:0002616!1.84e-34!59;UBERON:0002780!1.38e-31!41;UBERON:0001890!1.38e-31!41;UBERON:0006240!1.38e-31!41;UBERON:0000955!1.89e-31!69;UBERON:0006238!1.89e-31!69;UBERON:0002346!2.93e-31!90;UBERON:0003075!9.46e-31!86;UBERON:0007284!9.46e-31!86;UBERON:0003080!1.92e-30!42;UBERON:0001893!1.90e-25!34;UBERON:0002020!4.03e-25!34;UBERON:0003528!4.03e-25!34;UBERON:0002791!1.69e-24!33;UBERON:0001869!5.71e-24!32;UBERON:0003056!7.04e-23!61;UBERON:0000153!7.00e-21!129;UBERON:0007811!7.00e-21!129;UBERON:0000924!7.25e-20!173;UBERON:0006601!7.25e-20!173;UBERON:0002619!7.88e-20!22;UBERON:0004121!3.46e-19!169;UBERON:0000033!1.67e-18!123;UBERON:0001950!2.53e-18!20;UBERON:0000956!4.96e-18!25;UBERON:0000203!4.96e-18!25;UBERON:0003076!2.31e-09!15;UBERON:0003057!2.31e-09!15;UBERON:0000025!4.06e-09!194;UBERON:0002420!8.66e-09!9;UBERON:0007245!8.66e-09!9;UBERON:0010009!8.66e-09!9;UBERON:0010011!8.66e-09!9;UBERON:0000454!8.66e-09!9;UBERON:0000477!1.28e-08!286;UBERON:0002308!1.43e-08!9;UBERON:0000125!1.43e-08!9;UBERON:0001871!1.92e-08!7;UBERON:0001894!1.43e-07!7;UBERON:0006222!1.43e-07!7;UBERON:0004733!1.63e-07!12;UBERON:0002028!1.63e-07!12;UBERON:0007277!1.63e-07!12;UBERON:0009663!3.38e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!5.72e-50!115;UBERON:0001049!9.36e-39!57;UBERON:0005068!9.36e-39!57;UBERON:0006241!9.36e-39!57;UBERON:0007135!9.36e-39!57;UBERON:0001017!6.93e-37!82;UBERON:0005743!2.08e-35!86;UBERON:0000073!3.26e-35!94;UBERON:0001016!3.26e-35!94;UBERON:0002616!1.84e-34!59;UBERON:0002780!1.38e-31!41;UBERON:0001890!1.38e-31!41;UBERON:0006240!1.38e-31!41;UBERON:0000955!1.89e-31!69;UBERON:0006238!1.89e-31!69;UBERON:0002346!2.93e-31!90;UBERON:0003075!9.46e-31!86;UBERON:0007284!9.46e-31!86;UBERON:0003080!1.92e-30!42;UBERON:0001893!1.90e-25!34;UBERON:0002020!4.03e-25!34;UBERON:0003528!4.03e-25!34;UBERON:0002791!1.69e-24!33;UBERON:0001869!5.71e-24!32;UBERON:0003056!7.04e-23!61;UBERON:0000153!7.00e-21!129;UBERON:0007811!7.00e-21!129;UBERON:0000924!7.25e-20!173;UBERON:0006601!7.25e-20!173;UBERON:0002619!7.88e-20!22;UBERON:0004121!3.46e-19!169;UBERON:0000033!1.67e-18!123;UBERON:0001950!2.53e-18!20;UBERON:0000956!4.96e-18!25;UBERON:0000203!4.96e-18!25;UBERON:0003076!2.31e-09!15;UBERON:0003057!2.31e-09!15;UBERON:0000025!4.06e-09!194;UBERON:0002420!8.66e-09!9;UBERON:0007245!8.66e-09!9;UBERON:0010009!8.66e-09!9;UBERON:0010011!8.66e-09!9;UBERON:0000454!8.66e-09!9;UBERON:0000477!1.28e-08!286;UBERON:0002308!1.43e-08!9;UBERON:0000125!1.43e-08!9;UBERON:0001871!1.92e-08!7;UBERON:0001894!1.43e-07!7;UBERON:0006222!1.43e-07!7;UBERON:0004733!1.63e-07!12;UBERON:0002028!1.63e-07!12;UBERON:0007277!1.63e-07!12;UBERON:0009663!3.38e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-38;41!UBERON:0001890;1.27e-38;41!UBERON:0001893;2.13e-38;34!UBERON:0001950;3.01e-37;20!UBERON:0002619;4.09e-37;22!UBERON:0000073;7.54e-37;53!UBERON:0002616;7.54e-37;53!UBERON:0001869;9.91e-37;32!UBERON:0002791;1.87e-36;32!UBERON:0003528;1.70e-34;34!UBERON:0002020;1.70e-34;34!UBERON:0000956;4.50e-32;25!UBERON:0000203;4.50e-32;25!UBERON:0000955;1.88e-23;68!UBERON:0001017;5.00e-23;75!UBERON:0001016;3.98e-20;83!UBERON:0007023;3.13e-16;114!UBERON:0001871;4.84e-14;6!UBERON:0002420;2.15e-13;9!UBERON:0007245;2.15e-13;9!UBERON:0010009;2.15e-13;9!UBERON:0010011;2.15e-13;9!UBERON:0000454;2.15e-13;9!UBERON:0001872;1.86e-11;5!UBERON:0001894;2.27e-11;7!UBERON:0002021;2.54e-11;5!UBERON:0000125;1.98e-10;9!UBERON:0002308;1.98e-10;9!UBERON:0004733;2.05e-10;12!UBERON:0002028;2.05e-10;12!UBERON:0009663;2.27e-10;7!UBERON:0004732;1.72e-09;13!UBERON:0000200;2.26e-09;6!UBERON:0000369;3.20e-09;4!UBERON:0002435;3.20e-09;4!UBERON:0000204;3.20e-09;4!UBERON:0011216;2.91e-08;132!UBERON:0002298;3.73e-08;6!UBERON:0005383;2.17e-07;3!UBERON:0005382;2.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.97e-66,56;UBERON:0005068,5.97e-66,56;UBERON:0006241,5.97e-66,56;UBERON:0007135,5.97e-66,56;UBERON:0000073,3.26e-64,53;UBERON:0002616,3.26e-64,53;UBERON:0001017,5.06e-57,81;UBERON:0007023,2.89e-55,114;UBERON:0002780,6.82e-55,41;UBERON:0001890,6.82e-55,41;UBERON:0003080,6.82e-55,41;UBERON:0006240,6.82e-55,41;UBERON:0000955,2.43e-54,68;UBERON:0006238,2.43e-54,68;UBERON:0001016,3.37e-52,89;UBERON:0003075,2.06e-47,82;UBERON:0007284,2.06e-47,82;UBERON:0001893,6.24e-45,34;UBERON:0002346,1.46e-44,86;UBERON:0001869,7.51e-42,32;UBERON:0003528,1.91e-41,34;UBERON:0002020,1.91e-41,34;UBERON:0002791,2.60e-41,32;UBERON:0010371,1.04e-37,104;UBERON:0001950,2.01e-37,20;UBERON:0002619,2.40e-37,22;UBERON:0003056,1.11e-35,61;UBERON:0010314,5.96e-33,132;UBERON:0000956,2.82e-32,25;UBERON:0000203,2.82e-32,25;UBERON:0004121,4.42e-27,171;UBERON:0000924,4.42e-27,171;UBERON:0006601,4.42e-27,171;UBERON:0011216,4.39e-18,223;UBERON:0000025,5.48e-17,192;UBERON:0001871,4.04e-14,6;UBERON:0002420,1.08e-13,9;UBERON:0007245,1.08e-13,9;UBERON:0010009,1.08e-13,9;UBERON:0010011,1.08e-13,9;UBERON:0000454,1.08e-13,9;UBERON:0004111,7.68e-13,240;UBERON:0003076,2.34e-12,15;UBERON:0003057,2.34e-12,15;UBERON:0001872,1.50e-11,5;UBERON:0002021,2.99e-11,5;UBERON:0001894,3.76e-11,7;UBERON:0006222,3.76e-11,7;UBERON:0004733,1.25e-10,12;UBERON:0002028,1.25e-10,12;UBERON:0007277,1.25e-10,12;UBERON:0000125,1.61e-10,9;UBERON:0002308,1.61e-10,9;UBERON:0009663,2.07e-10,7;UBERON:0000483,6.97e-10,306;UBERON:0004732,1.09e-09,13;UBERON:0000119,1.21e-09,309;UBERON:0000369,1.98e-09,4;UBERON:0002435,1.98e-09,4;UBERON:0000204,1.98e-09,4;UBERON:0010082,1.98e-09,4;UBERON:0000200,2.64e-09,6;UBERON:0002298,2.02e-08,6;UBERON:0005383,1.76e-07,3;UBERON:0005382,1.76e-07,3;UBERON:0000349,4.83e-07,5 | |||
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| ||
|short_description=p3@SYNE2 | |short_description=p3@SYNE2 | ||
}} | }} |
Latest revision as of 01:05, 25 September 2015
Short description: | p3@SYNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNE2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 222bp_to_ENST00000553801_5end |
EntrezGene: | SYNE2 |
HGNC: | 17084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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B cell | 4.30e-08 | 14 |