FFCP PHASE1:Hg19::chr12:80658848..80658862,+: Difference between revisions
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|id=chr12:80658848..80658862,+
|short_description=p@chr12:80658848..80658862,+
|description=CAGE_peak_at_chr12:80658848..80658862,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:80658848..80658862,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr12:80658848..80658862,+ | |||
|id=chr12:80658848..80658862,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.14e-09!6;CL:0000031!3.14e-09!6;CL:0000404!3.14e-09!6;CL:0000128!3.70e-08!7;CL:0000126!3.70e-08!7;CL:0000127!3.70e-08!7;CL:0002453!3.70e-08!7;CL:0002319!1.14e-07!25;CL:0000047!3.90e-07!8;CL:0000133!5.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.34e-34;1 | |||
|ontology_enrichment_disease=DOID:3371!3.08e-14!1;DOID:4549!3.08e-14!1;DOID:5861!3.08e-14!1;DOID:6496!3.08e-14!1;DOID:6193!9.73e-14!1;DOID:3350!1.64e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:5409;1.38e-09;4!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:5409,1.32e-09,4;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0001987;1.63e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0001987,1.57e-09,4;UBERON:0004340,1.57e-09,4 | |||
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|short_description=p@chr12:80658848..80658862,+ | |||
}} | }} |
Latest revision as of 01:07, 25 September 2015
Short description: | p@chr12:80658848..80658862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:80658848..80658862, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
placenta | 1.57e-09 | 4 |
allantois | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
lung small cell carcinoma | 1.32e-09 | 4 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |