FFCP PHASE1:Hg19::chr3:138666070..138666100,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:138666070..138666100,+
|short_description=p1@C3orf72
|description=CAGE_peak_1_at_C3orf72_5end
|association_with_transcript=0bp_to_ENST00000383165,ENST00000...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401089 | |EntrezGene=401089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34428 | |HGNC=34428 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZUU3,F8WBY5 | |UniProt=Q6ZUU3,F8WBY5 | ||
|association_with_transcript=0bp_to_ENST00000383165,ENST00000470680,NM_001040061,uc003esx.1_5end | |||
|cluster_id=chr3:138666070..138666100,+ | |||
|coexpression_cluster_id=C1920 | |||
|description=CAGE_peak_1_at_C3orf72_5end | |||
|id=chr3:138666070..138666100,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.55e-11!23;CL:0000066!8.98e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.84e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.89e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.03e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.65e-08;3!DOID:127;2.65e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.00e-10,239;DOID:0060084,2.52e-08,3;DOID:127,2.52e-08,3;DOID:162,4.21e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.69e-09!40;UBERON:0001737!1.51e-08!9;UBERON:0002199!4.76e-07!45;UBERON:0002416!4.76e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.65e-10;9!UBERON:0001557;2.65e-10;9!UBERON:0000474;1.30e-07;37!UBERON:0003134;3.52e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.76e-10,9;UBERON:0003134,9.16e-10,37;UBERON:0000474,9.16e-10,37;UBERON:0003133,8.54e-09,48;UBERON:0003100,1.91e-08,41;UBERON:0005156,2.63e-08,59;UBERON:0000990,2.63e-08,59;UBERON:0005795,4.62e-08,22;UBERON:0002097,6.07e-08,41;UBERON:0000995,8.55e-07,21 | |||
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| ||
|short_description=p1@C3orf72 | |||
}} | }} |
Latest revision as of 01:32, 25 September 2015
Short description: | p1@C3orf72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C3orf72_5end |
Coexpression cluster: | C1920_ovary_granulosa_chorionic_Mesenchymal_Fibroblast_tubular_leiomyoma |
Association with transcript: | 0bp_to_ENST00000383165, ENST00000470680, NM_001040061, uc003esx.1_5end |
EntrezGene: | C3orf72 |
HGNC: | 34428 |
UniProt: | Q6ZUU3F8WBY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.76e-10 | 9 |
female reproductive organ | 9.16e-10 | 37 |
female reproductive system | 9.16e-10 | 37 |
reproductive organ | 8.54e-09 | 48 |
female organism | 1.91e-08 | 41 |
reproductive structure | 2.63e-08 | 59 |
reproductive system | 2.63e-08 | 59 |
embryonic uterus | 4.62e-08 | 22 |
skin of body | 6.07e-08 | 41 |
uterus | 8.55e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.00e-10 | 239 |
cell type benign neoplasm | 2.52e-08 | 3 |
leiomyoma | 2.52e-08 | 3 |
cancer | 4.21e-07 | 235 |