FFCP PHASE1:Hg19::chr7:107301264..107301278,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5172 | |EntrezGene=5172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8818 | |HGNC=8818 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQG1 | |UniProt=C9JQG1 | ||
|association_with_transcript=-170bp_to_ENST00000440056_5end | |association_with_transcript=-170bp_to_ENST00000440056_5end | ||
|cluster_id=chr7:107301264..107301278,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_1_at_SLC26A4_5end | |description=CAGE_peak_1_at_SLC26A4_5end | ||
|id=chr7:107301264..107301278,+ | |id=chr7:107301264..107301278,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.61e-14;5!UBERON:0009847;9.91e-07;3!UBERON:0003353;9.91e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.71e-34!20;UBERON:0002619!5.47e-31!22;UBERON:0001893!5.81e-28!34;UBERON:0000956!5.51e-27!25;UBERON:0000203!5.51e-27!25;UBERON:0001869!1.07e-26!32;UBERON:0002791!1.50e-25!33;UBERON:0002780!1.53e-22!41;UBERON:0001890!1.53e-22!41;UBERON:0006240!1.53e-22!41;UBERON:0003080!6.51e-22!42;UBERON:0002020!7.33e-22!34;UBERON:0003528!7.33e-22!34;UBERON:0003056!1.12e-17!61;UBERON:0007023!2.04e-15!115;UBERON:0001871!2.24e-15!7;UBERON:0001049!4.28e-15!57;UBERON:0005068!4.28e-15!57;UBERON:0006241!4.28e-15!57;UBERON:0007135!4.28e-15!57;UBERON:0002616!1.91e-14!59;UBERON:0000200!2.69e-14!6;UBERON:0000955!4.97e-13!69;UBERON:0006238!4.97e-13!69;UBERON:0000153!1.42e-11!129;UBERON:0007811!1.42e-11!129;UBERON:0002021!1.79e-11!5;UBERON:0003075!3.38e-11!86;UBERON:0007284!3.38e-11!86;UBERON:0002771!4.93e-11!3;UBERON:0005743!6.37e-11!86;UBERON:0002346!1.69e-10!90;UBERON:0001017!2.55e-10!82;UBERON:0000073!1.77e-09!94;UBERON:0001016!1.77e-09!94;UBERON:0000033!4.46e-09!123;UBERON:0000341!7.38e-09!2;UBERON:0001872!7.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.94e-34;2!UBERON:0002046;1.61e-14;5!UBERON:0000974;4.42e-12;6!UBERON:0003127;1.12e-09;2!UBERON:0002114;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.62e-34,2;UBERON:0002046,1.61e-14,5;UBERON:0004117,1.61e-14,5;UBERON:0007689,1.61e-14,5;UBERON:0007123,1.61e-14,5;UBERON:0003091,1.61e-14,5;UBERON:0003127,1.12e-09,2;UBERON:0000974,1.29e-07,10;UBERON:0009722,4.30e-07,11;UBERON:0007690,4.30e-07,11;UBERON:0002114,9.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,1.00311897234407,0,0,0,0.334231370655521,0,0,0.270803863765016,0.768547918354051,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,6.0977433463901,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,3.38864541386552,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.19024743058172,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,1.02041020705668,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,7.85612623830343,0.0645889098360061,0,0,28.577574066896,29.3069923989418,0,0,0.0673520530145875,5.66605422602143,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,1.00311897234407,0,0,0,0.334231370655521,0,0,0.270803863765016,0.768547918354051,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,6.0977433463901,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,3.38864541386552,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.19024743058172,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,1.02041020705668,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,7.85612623830343,0.0645889098360061,0,0,28.577574066896,29.3069923989418,0,0,0.0673520530145875,5.66605422602143,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p1@SLC26A4 | |short_description=p1@SLC26A4 | ||
}} | }} |
Latest revision as of 01:40, 25 September 2015
Short description: | p1@SLC26A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC26A4_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -170bp_to_ENST00000440056_5end |
EntrezGene: | SLC26A4 |
HGNC: | 8818 |
UniProt: | C9JQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 3.62e-34 | 2 |
thyroid gland | 1.61e-14 | 5 |
pharyngeal pouch | 1.61e-14 | 5 |
thyroid diverticulum | 1.61e-14 | 5 |
pharyngeal pouch 2 | 1.61e-14 | 5 |
thyroid primordium | 1.61e-14 | 5 |
open tracheal system trachea | 1.12e-09 | 2 |
neck | 1.29e-07 | 10 |
entire pharyngeal arch endoderm | 4.30e-07 | 11 |
early pharyngeal endoderm | 4.30e-07 | 11 |
duodenum | 9.64e-07 | 2 |