FFCP PHASE2:Hg19::chr16:20775312..20775352,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6296 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10522 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10522 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q53FZ2 | ||
|association_with_transcript=0bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end | |association_with_transcript=0bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end | ||
|cluster_id=chr16:20775312..20775352,+ | |cluster_id=chr16:20775312..20775352,+ |
Latest revision as of 02:30, 25 September 2015
Short description: | p1@ACSM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACSM3_5end |
Coexpression cluster: | C3542_signet_adenocarcinoma_chronic_liver_Hepatocyte_kidney_gastric |
Association with transcript: | 0bp_to_ENST00000289416, ENST00000440284, NM_005622, NM_202000, uc002dhq.2, uc002dhr.2_5end |
EntrezGene: | ACSM3 |
HGNC: | 10522 |
UniProt: | Q53FZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ACSM3 |
---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.21e-13 | 18 |
alpha-beta T cell | 1.21e-13 | 18 |
immature T cell | 1.21e-13 | 18 |
mature T cell | 1.21e-13 | 18 |
immature alpha-beta T cell | 1.21e-13 | 18 |
lymphoid lineage restricted progenitor cell | 1.50e-12 | 52 |
lymphocyte | 4.10e-12 | 53 |
common lymphoid progenitor | 4.10e-12 | 53 |
T cell | 7.50e-11 | 25 |
pro-T cell | 7.50e-11 | 25 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
---|---|---|
blood | 2.50e-07 | 15 |
haemolymphatic fluid | 2.50e-07 | 15 |
organism substance | 2.50e-07 | 15 |
subdivision of digestive tract | 7.81e-07 | 118 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.84e-08 | 31 |
leukemia | 4.20e-08 | 39 |
hematologic cancer | 4.35e-08 | 51 |
immune system cancer | 4.35e-08 | 51 |
Showing 1 to 4 of 4 entries