Personal tools

FFCP PHASE2:Hg19::chr16:20775312..20775352,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6296 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10522 |TSSclas...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:6296
|EntrezGene=6296
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:10522
|HGNC=10522
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:Q53FZ2
|UniProt=Q53FZ2
|association_with_transcript=0bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end
|association_with_transcript=0bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end
|cluster_id=chr16:20775312..20775352,+
|cluster_id=chr16:20775312..20775352,+

Latest revision as of 02:30, 25 September 2015

Short description:p1@ACSM3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_ACSM3_5end
Coexpression cluster:C3542_signet_adenocarcinoma_chronic_liver_Hepatocyte_kidney_gastric
Association with transcript: 0bp_to_ENST00000289416, ENST00000440284, NM_005622, NM_202000, uc002dhq.2, uc002dhr.2_5end
EntrezGene:ACSM3
HGNC: 10522
UniProt: Q53FZ2
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
20
40
60
80
100




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data