FFCP PHASE2:Hg19::chr14:65482313..65482330,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:100529261,entrezgene:2342 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGN...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=100529261,2342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=42960,3785 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B3KSC2 | ||
|association_with_transcript=12bp_to_ENST00000448390,uc001xid.2,uc010tso.1_5end | |association_with_transcript=12bp_to_ENST00000448390,uc001xid.2,uc010tso.1_5end | ||
|cluster_id=chr14:65482313..65482330,+ | |cluster_id=chr14:65482313..65482330,+ | ||
Latest revision as of 02:54, 25 September 2015
| Short description: | p4@CHURC1-FNTB, p7@FNTB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_CHURC1-FNTB_5end, CAGE_peak_7_at_FNTB_5end |
| Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
| Association with transcript: | 12bp_to_ENST00000448390, uc001xid.2, uc010tso.1_5end |
| EntrezGene: | 100529261,2342 |
| HGNC: | 3785&submit=Submit 42960, 3785 |
| UniProt: | B3KSC2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@CHURC1-FNTBp7@FNTB |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| brainstem | 4.91e-62 | 6 |
| posterior neural tube | 2.49e-55 | 15 |
| chordal neural plate | 2.49e-55 | 15 |
| neural tube | 3.33e-39 | 56 |
| neural rod | 3.33e-39 | 56 |
| future spinal cord | 3.33e-39 | 56 |
| neural keel | 3.33e-39 | 56 |
| segmental subdivision of nervous system | 7.88e-39 | 13 |
| spinal cord | 1.95e-32 | 3 |
| dorsal region element | 1.95e-32 | 3 |
Showing 1 to 10 of 87 entries
