FFCP PHASE1:Hg19::chr11:111685458..111685469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79796 | |EntrezGene=79796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15672 | |HGNC=15672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000527212_5end | |association_with_transcript=-13bp_to_ENST00000527212_5end | ||
|cluster_id=chr11:111685458..111685469,- | |||
|coexpression_cluster_id=C2094 | |coexpression_cluster_id=C2094 | ||
|description=CAGE_peak_9_at_ALG9_5end | |description=CAGE_peak_9_at_ALG9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002552!2.58e-08!5 | |ontology_enrichment_celltype=CL:0002552!2.58e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000342;1.30e-09;1!CL:0002565;1.30e-09;1!CL:0002552;1.10e-07;5 | |ontology_enrichment_celltype_v019=CL:0000342;1.30e-09;1!CL:0002565;1.30e-09;1!CL:0002552;1.10e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000342,1.25e-09,1;CL:0002565,1.25e-09,1;CL:0002552,1.27e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.82e-13;29!UBERON:0010227;3.90e-10;1 | |ontology_enrichment_development_v019=UBERON:0008947;2.82e-13;29!UBERON:0010227;3.90e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-28!115;UBERON:0001737!7.75e-17!9;UBERON:0000477!4.38e-15!286;UBERON:0002616!2.99e-14!59;UBERON:0002346!1.57e-12!90;UBERON:0001017!2.41e-12!82;UBERON:0005743!3.14e-12!86;UBERON:0001049!4.15e-12!57;UBERON:0005068!4.15e-12!57;UBERON:0006241!4.15e-12!57;UBERON:0007135!4.15e-12!57;UBERON:0000481!7.25e-12!347;UBERON:0000955!9.36e-12!69;UBERON:0006238!9.36e-12!69;UBERON:0003075!2.06e-11!86;UBERON:0007284!2.06e-11!86;UBERON:0000073!3.44e-11!94;UBERON:0001016!3.44e-11!94;UBERON:0000924!1.92e-09!173;UBERON:0006601!1.92e-09!173;UBERON:0000033!2.23e-09!123;UBERON:0004121!1.38e-08!169;UBERON:0000153!1.68e-08!129;UBERON:0007811!1.68e-08!129;UBERON:0002020!2.32e-08!34;UBERON:0003528!2.32e-08!34;UBERON:0002780!3.16e-08!41;UBERON:0001890!3.16e-08!41;UBERON:0006240!3.16e-08!41;UBERON:0000062!5.44e-08!511;UBERON:0003080!6.27e-08!42;UBERON:0002308!8.95e-08!9;UBERON:0000125!8.95e-08!9;UBERON:0000064!9.72e-08!219;UBERON:0000923!3.04e-07!604;UBERON:0005291!3.04e-07!604;UBERON:0006598!3.04e-07!604;UBERON:0002532!3.04e-07!604;UBERON:0002050!3.45e-07!605;UBERON:0005423!3.45e-07!605;UBERON:0001893!4.02e-07!34;UBERON:0000468!4.11e-07!659;UBERON:0004111!4.27e-07!241;UBERON:0002298!6.41e-07!8;UBERON:0000922!8.30e-07!612;UBERON:0001557!9.42e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!1.01e-28!115;UBERON:0001737!7.75e-17!9;UBERON:0000477!4.38e-15!286;UBERON:0002616!2.99e-14!59;UBERON:0002346!1.57e-12!90;UBERON:0001017!2.41e-12!82;UBERON:0005743!3.14e-12!86;UBERON:0001049!4.15e-12!57;UBERON:0005068!4.15e-12!57;UBERON:0006241!4.15e-12!57;UBERON:0007135!4.15e-12!57;UBERON:0000481!7.25e-12!347;UBERON:0000955!9.36e-12!69;UBERON:0006238!9.36e-12!69;UBERON:0003075!2.06e-11!86;UBERON:0007284!2.06e-11!86;UBERON:0000073!3.44e-11!94;UBERON:0001016!3.44e-11!94;UBERON:0000924!1.92e-09!173;UBERON:0006601!1.92e-09!173;UBERON:0000033!2.23e-09!123;UBERON:0004121!1.38e-08!169;UBERON:0000153!1.68e-08!129;UBERON:0007811!1.68e-08!129;UBERON:0002020!2.32e-08!34;UBERON:0003528!2.32e-08!34;UBERON:0002780!3.16e-08!41;UBERON:0001890!3.16e-08!41;UBERON:0006240!3.16e-08!41;UBERON:0000062!5.44e-08!511;UBERON:0003080!6.27e-08!42;UBERON:0002308!8.95e-08!9;UBERON:0000125!8.95e-08!9;UBERON:0000064!9.72e-08!219;UBERON:0000923!3.04e-07!604;UBERON:0005291!3.04e-07!604;UBERON:0006598!3.04e-07!604;UBERON:0002532!3.04e-07!604;UBERON:0002050!3.45e-07!605;UBERON:0005423!3.45e-07!605;UBERON:0001893!4.02e-07!34;UBERON:0000468!4.11e-07!659;UBERON:0004111!4.27e-07!241;UBERON:0002298!6.41e-07!8;UBERON:0000922!8.30e-07!612;UBERON:0001557!9.42e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.83e-44;9!UBERON:0001557;2.83e-44;9!UBERON:0002079;3.90e-10;1!UBERON:0000072;8.40e-10;37!UBERON:0002135;1.30e-09;1!UBERON:0002506;1.30e-09;1!UBERON:0001769;1.30e-09;1!UBERON:0005284;1.10e-07;5!UBERON:0000065;1.21e-07;44!UBERON:0006876;2.09e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.83e-44;9!UBERON:0001557;2.83e-44;9!UBERON:0002079;3.90e-10;1!UBERON:0000072;8.40e-10;37!UBERON:0002135;1.30e-09;1!UBERON:0002506;1.30e-09;1!UBERON:0001769;1.30e-09;1!UBERON:0005284;1.10e-07;5!UBERON:0000065;1.21e-07;44!UBERON:0006876;2.09e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.78e-45,9;UBERON:0001557,4.81e-21,19;UBERON:0008947,3.79e-10,38;UBERON:0003258,3.79e-10,38;UBERON:0002079,4.09e-10,1;UBERON:0002506,1.25e-09,1;UBERON:0001769,1.25e-09,1;UBERON:0002135,2.26e-09,1;UBERON:0000072,4.70e-08,47;UBERON:0001004,6.62e-08,74;UBERON:0005284,1.36e-07,5;UBERON:0006876,2.38e-07,11;UBERON:0000065,6.58e-07,54 | |||
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|short_description=p9@ALG9 | |short_description=p9@ALG9 | ||
}} | }} |
Latest revision as of 03:09, 25 September 2015
Short description: | p9@ALG9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ALG9_5end |
Coexpression cluster: | C2094_Fibroblast_Mesenchymal_neuroectodermal_Hep2_smooth_Smooth_left |
Association with transcript: | -13bp_to_ENST00000527212_5end |
EntrezGene: | ALG9 |
HGNC: | 15672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 1.25e-09 | 1 |
iris pigment epithelial cell | 1.25e-09 | 1 |
fibroblast of gingiva | 1.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.78e-45 | 9 |
upper respiratory tract | 4.81e-21 | 19 |
respiratory primordium | 3.79e-10 | 38 |
endoderm of foregut | 3.79e-10 | 38 |
left cardiac atrium | 4.09e-10 | 1 |
iris epithelium | 1.25e-09 | 1 |
iris | 1.25e-09 | 1 |
mitral valve | 2.26e-09 | 1 |
segment of respiratory tract | 4.70e-08 | 47 |
respiratory system | 6.62e-08 | 74 |
brain vasculature | 1.36e-07 | 5 |
vasculature of organ | 2.38e-07 | 11 |
respiratory tract | 6.58e-07 | 54 |