FFCP PHASE1:Hg19::chr16:20912079..20912113,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:20912079..20912113,+
|short_description=p1@LYRM1
|description=CAGE_peak_1_at_LYRM1_5end
|association_with_transcript=4bp_to_ENST00000219168,ENST0000041208...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57149 | |EntrezGene=57149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25074 | |HGNC=25074 | ||
|TSSclassifier=strong | |||
|UniProt=O43325 | |UniProt=O43325 | ||
|association_with_transcript=4bp_to_ENST00000219168,ENST00000412082,NM_001128301,NM_001128302,uc002dia.3,uc010bwl.2,uc010bwm.2_5end | |||
|cluster_id=chr16:20912079..20912113,+ | |||
|description=CAGE_peak_1_at_LYRM1_5end | |||
|id=chr16:20912079..20912113,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-32!115;UBERON:0001049!1.63e-18!57;UBERON:0005068!1.63e-18!57;UBERON:0006241!1.63e-18!57;UBERON:0007135!1.63e-18!57;UBERON:0000073!2.21e-18!94;UBERON:0001016!2.21e-18!94;UBERON:0001017!2.02e-17!82;UBERON:0005743!3.92e-17!86;UBERON:0000955!4.51e-15!69;UBERON:0006238!4.51e-15!69;UBERON:0003075!5.16e-15!86;UBERON:0007284!5.16e-15!86;UBERON:0002616!6.94e-15!59;UBERON:0003080!8.40e-15!42;UBERON:0002346!1.85e-14!90;UBERON:0002780!2.99e-14!41;UBERON:0001890!2.99e-14!41;UBERON:0006240!2.99e-14!41;UBERON:0002020!4.44e-12!34;UBERON:0003528!4.44e-12!34;UBERON:0001869!4.99e-12!32;UBERON:0001893!1.88e-11!34;UBERON:0004121!2.05e-11!169;UBERON:0000924!3.19e-11!173;UBERON:0006601!3.19e-11!173;UBERON:0002619!3.44e-11!22;UBERON:0002791!3.97e-11!33;UBERON:0003056!5.38e-11!61;UBERON:0001950!2.99e-10!20;UBERON:0000153!3.93e-10!129;UBERON:0007811!3.93e-10!129;UBERON:0000956!6.77e-10!25;UBERON:0000203!6.77e-10!25;UBERON:0000033!1.78e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.97e-11;22!UBERON:0001869;7.37e-11;32!UBERON:0003528;1.38e-10;34!UBERON:0002020;1.38e-10;34!UBERON:0002780;2.13e-10;41!UBERON:0001890;2.13e-10;41!UBERON:0001950;3.55e-10;20!UBERON:0002791;4.19e-10;32!UBERON:0001893;6.13e-10;34!UBERON:0000956;1.05e-09;25!UBERON:0000203;1.05e-09;25!UBERON:0007023;1.55e-09;114!UBERON:0000073;1.79e-09;53!UBERON:0002616;1.79e-09;53!UBERON:0000955;1.28e-07;68!UBERON:0001016;2.95e-07;83!UBERON:0001017;7.62e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.50e-32,114;UBERON:0001016,3.83e-18,89;UBERON:0001049,5.86e-18,56;UBERON:0005068,5.86e-18,56;UBERON:0006241,5.86e-18,56;UBERON:0007135,5.86e-18,56;UBERON:0001017,6.47e-17,81;UBERON:0000073,1.43e-16,53;UBERON:0002616,1.43e-16,53;UBERON:0003075,1.11e-14,82;UBERON:0007284,1.11e-14,82;UBERON:0000955,1.42e-14,68;UBERON:0006238,1.42e-14,68;UBERON:0002780,2.99e-14,41;UBERON:0001890,2.99e-14,41;UBERON:0003080,2.99e-14,41;UBERON:0006240,2.99e-14,41;UBERON:0002346,4.11e-14,86;UBERON:0011216,2.30e-12,223;UBERON:0003528,4.44e-12,34;UBERON:0002020,4.44e-12,34;UBERON:0001869,4.99e-12,32;UBERON:0010314,1.28e-11,132;UBERON:0001893,1.88e-11,34;UBERON:0002619,3.44e-11,22;UBERON:0002791,3.81e-11,32;UBERON:0003056,7.12e-11,61;UBERON:0004121,7.77e-11,171;UBERON:0000924,7.77e-11,171;UBERON:0006601,7.77e-11,171;UBERON:0001950,2.99e-10,20;UBERON:0000956,6.77e-10,25;UBERON:0000203,6.77e-10,25;UBERON:0010371,7.61e-10,104 | |||
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| ||
|short_description=p1@LYRM1 | |||
}} | }} |
Latest revision as of 03:11, 25 September 2015
Short description: | p1@LYRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYRM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000219168, ENST00000412082, NM_001128301, NM_001128302, uc002dia.3, uc010bwl.2, uc010bwm.2_5end |
EntrezGene: | LYRM1 |
HGNC: | 25074 |
UniProt: | O43325 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data