FFCP PHASE1:Hg19::chr19:11039271..11039355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=78992 | |EntrezGene=78992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28476 | |HGNC=28476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002mqb.2_5end | |association_with_transcript=0bp_to_uc002mqb.2_5end | ||
|cluster_id=chr19:11039271..11039355,- | |||
|coexpression_cluster_id=C1147 | |coexpression_cluster_id=C1147 | ||
|description=CAGE_peak_1_at_YIPF2_5end | |description=CAGE_peak_1_at_YIPF2_5end | ||
|id=chr19:11039271..11039355,- | |id=chr19:11039271..11039355,- | ||
|ontology_enrichment_celltype=CL:0000055!1.46e-27!180;CL:0000222!2.50e-20!119;CL:0000183!1.21e-19!59;CL:0000680!3.67e-18!57;CL:0000056!3.67e-18!57;CL:0000355!3.67e-18!57;CL:0000187!1.88e-17!54;CL:0000192!2.81e-17!42;CL:0000514!2.81e-17!42;CL:0000393!1.71e-14!60;CL:0000211!1.71e-14!60;CL:0000359!1.12e-13!32;CL:0000144!1.77e-13!625;CL:0000057!7.56e-13!75;CL:0002321!1.16e-12!248;CL:0000220!1.42e-12!246;CL:0002371!6.38e-12!591;CL:0000548!6.88e-12!679;CL:0000004!6.88e-12!679;CL:0000255!6.88e-12!679;CL:0000012!1.40e-11!682 | |ontology_enrichment_celltype=CL:0000055!1.46e-27!180;CL:0000222!2.50e-20!119;CL:0000183!1.21e-19!59;CL:0000680!3.67e-18!57;CL:0000056!3.67e-18!57;CL:0000355!3.67e-18!57;CL:0000187!1.88e-17!54;CL:0000192!2.81e-17!42;CL:0000514!2.81e-17!42;CL:0000393!1.71e-14!60;CL:0000211!1.71e-14!60;CL:0000359!1.12e-13!32;CL:0000144!1.77e-13!625;CL:0000057!7.56e-13!75;CL:0002321!1.16e-12!248;CL:0000220!1.42e-12!246;CL:0002371!6.38e-12!591;CL:0000548!6.88e-12!679;CL:0000004!6.88e-12!679;CL:0000255!6.88e-12!679;CL:0000012!1.40e-11!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.38e-13;32!CL:0000192;1.56e-12;43!CL:0000134;6.58e-10;55!CL:0000187;7.02e-10;55!CL:0000048;3.05e-08;58!CL:0000723;3.20e-08;61!CL:0000393;1.12e-07;61!CL:0000211;1.12e-07;61!CL:0000349;1.15e-07;19!CL:0000034;4.69e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.77e-20,121;CL:0000680,3.67e-18,58;CL:0000056,3.67e-18,58;CL:0000355,3.67e-18,58;CL:0000187,1.90e-17,55;CL:0000192,3.14e-17,43;CL:0000514,3.14e-17,43;CL:0000393,1.58e-14,61;CL:0000211,1.58e-14,61;CL:0000359,1.12e-13,32;CL:0000057,4.41e-13,76;CL:0002321,7.49e-13,250;CL:0000349,1.10e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.56e-12;43!CL:0000355;8.82e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.81e-18!143;UBERON:0000914!2.62e-17!83;UBERON:0002329!2.62e-17!83;UBERON:0003077!2.62e-17!83;UBERON:0003059!2.62e-17!83;UBERON:0007282!2.62e-17!83;UBERON:0009618!2.62e-17!83;UBERON:0007285!2.62e-17!83;UBERON:0004290!2.84e-17!70;UBERON:0000486!1.58e-16!82;UBERON:0001134!4.54e-16!61;UBERON:0002036!4.54e-16!61;UBERON:0003082!4.54e-16!61;UBERON:0002049!4.27e-15!79;UBERON:0007798!4.27e-15!79;UBERON:0002385!4.36e-15!63;UBERON:0001015!4.36e-15!63;UBERON:0000383!4.36e-15!63;UBERON:0002100!9.32e-15!216;UBERON:0000490!6.53e-14!138;UBERON:0003914!1.22e-13!118;UBERON:0004872!3.25e-13!84;UBERON:0000055!2.93e-12!69;UBERON:0003104!3.90e-12!238;UBERON:0009142!3.90e-12!238;UBERON:0001637!3.92e-12!42;UBERON:0003509!3.92e-12!42;UBERON:0004572!3.92e-12!42;UBERON:0001981!8.41e-12!60;UBERON:0007500!8.41e-12!60;UBERON:0004537!8.41e-12!60;UBERON:0006965!8.41e-12!60;UBERON:0000475!1.88e-10!365;UBERON:0004573!1.22e-09!33;UBERON:0004571!1.22e-09!33;UBERON:0004535!2.14e-09!110;UBERON:0000481!2.44e-09!347;UBERON:0001009!1.37e-08!113;UBERON:0000119!1.62e-08!312;UBERON:0000483!2.28e-08!309;UBERON:0009569!7.46e-07!113 | |ontology_enrichment_uberon=UBERON:0005256!6.81e-18!143;UBERON:0000914!2.62e-17!83;UBERON:0002329!2.62e-17!83;UBERON:0003077!2.62e-17!83;UBERON:0003059!2.62e-17!83;UBERON:0007282!2.62e-17!83;UBERON:0009618!2.62e-17!83;UBERON:0007285!2.62e-17!83;UBERON:0004290!2.84e-17!70;UBERON:0000486!1.58e-16!82;UBERON:0001134!4.54e-16!61;UBERON:0002036!4.54e-16!61;UBERON:0003082!4.54e-16!61;UBERON:0002049!4.27e-15!79;UBERON:0007798!4.27e-15!79;UBERON:0002385!4.36e-15!63;UBERON:0001015!4.36e-15!63;UBERON:0000383!4.36e-15!63;UBERON:0002100!9.32e-15!216;UBERON:0000490!6.53e-14!138;UBERON:0003914!1.22e-13!118;UBERON:0004872!3.25e-13!84;UBERON:0000055!2.93e-12!69;UBERON:0003104!3.90e-12!238;UBERON:0009142!3.90e-12!238;UBERON:0001637!3.92e-12!42;UBERON:0003509!3.92e-12!42;UBERON:0004572!3.92e-12!42;UBERON:0001981!8.41e-12!60;UBERON:0007500!8.41e-12!60;UBERON:0004537!8.41e-12!60;UBERON:0006965!8.41e-12!60;UBERON:0000475!1.88e-10!365;UBERON:0004573!1.22e-09!33;UBERON:0004571!1.22e-09!33;UBERON:0004535!2.14e-09!110;UBERON:0000481!2.44e-09!347;UBERON:0001009!1.37e-08!113;UBERON:0000119!1.62e-08!312;UBERON:0000483!2.28e-08!309;UBERON:0009569!7.46e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.40e-08;42!UBERON:0003509;1.40e-08;42!UBERON:0004572;1.40e-08;42!UBERON:0004573;1.52e-08;33!UBERON:0004571;1.52e-08;33!UBERON:0007500;4.95e-07;56!UBERON:0001981;4.95e-07;56!UBERON:0004537;4.95e-07;56!UBERON:0003914;5.54e-07;74 | |||
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| ||
|short_description=p1@YIPF2 | |short_description=p1@YIPF2 | ||
}} | }} |
Latest revision as of 03:33, 25 September 2015
Short description: | p1@YIPF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YIPF2_5end |
Coexpression cluster: | C1147_Mesenchymal_Renal_Alveolar_Fibroblast_Placental_Pericytes_Hepatic |
Association with transcript: | 0bp_to_uc002mqb.2_5end |
EntrezGene: | YIPF2 |
HGNC: | 28476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.77e-20 | 121 |
muscle precursor cell | 3.67e-18 | 58 |
myoblast | 3.67e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.67e-18 | 58 |
muscle cell | 1.90e-17 | 55 |
smooth muscle cell | 3.14e-17 | 43 |
smooth muscle myoblast | 3.14e-17 | 43 |
electrically responsive cell | 1.58e-14 | 61 |
electrically active cell | 1.58e-14 | 61 |
vascular associated smooth muscle cell | 1.12e-13 | 32 |
fibroblast | 4.41e-13 | 76 |
embryonic cell | 7.49e-13 | 250 |
extraembryonic cell | 1.10e-07 | 19 |