FFCP PHASE1:Hg19::chr2:228029016..228029028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1285 | |EntrezGene=1285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2204 | |HGNC=2204 | ||
|TSSclassifier=strong | |||
|UniProt=F8W841,E7ENN2,F8W849,F8W8L3,Q01955 | |UniProt=F8W841,E7ENN2,F8W849,F8W8L3,Q01955 | ||
|association_with_transcript=-252bp_to_ENST00000315699,ENST00000328380,ENST00000335583,ENST00000396574,ENST00000396578,NM_000091,uc002vom.1,uc002von.1,uc002voo.1,uc002vop.1_5end | |||
|cluster_id=chr2:228029016..228029028,+ | |||
|description=CAGE_peak_4_at_COL4A3_5end | |||
|id=chr2:228029016..228029028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;7.36e-18;1!UBERON:0006965;1.33e-09;2!UBERON:0007297;1.33e-09;2!UBERON:0003918;1.47e-07;10!UBERON:0007687;1.47e-07;10!UBERON:0003056;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-37!115;UBERON:0001049!2.14e-14!57;UBERON:0005068!2.14e-14!57;UBERON:0006241!2.14e-14!57;UBERON:0007135!2.14e-14!57;UBERON:0003075!9.83e-14!86;UBERON:0007284!9.83e-14!86;UBERON:0002780!5.83e-13!41;UBERON:0001890!5.83e-13!41;UBERON:0006240!5.83e-13!41;UBERON:0002346!1.04e-12!90;UBERON:0003080!1.61e-12!42;UBERON:0002616!1.95e-12!59;UBERON:0000955!2.33e-11!69;UBERON:0006238!2.33e-11!69;UBERON:0005743!3.10e-11!86;UBERON:0001017!4.46e-10!82;UBERON:0003056!6.34e-10!61;UBERON:0001894!1.46e-09!7;UBERON:0006222!1.46e-09!7;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0000477!4.79e-09!286;UBERON:0004111!6.81e-08!241;UBERON:0000153!7.24e-08!129;UBERON:0007811!7.24e-08!129;UBERON:0000025!1.01e-07!194;UBERON:0000033!2.12e-07!123;UBERON:0001893!2.13e-07!34;UBERON:0006947!5.46e-07!3;UBERON:0004054!5.46e-07!3;UBERON:0001871!6.00e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.91e-38;4!UBERON:0010133;5.91e-38;4!UBERON:0001905;7.07e-34;2!UBERON:0002757;7.07e-34;2!UBERON:0010134;7.07e-34;2!UBERON:0005408;7.07e-34;2!UBERON:0001899;7.07e-34;2!UBERON:0006947;5.74e-23;3!UBERON:0004054;5.74e-23;3!UBERON:0001894;4.92e-22;7!UBERON:0001000;7.36e-18;1!UBERON:0000998;7.36e-18;1!UBERON:0002135;7.36e-18;1!UBERON:0006868;7.36e-18;1!UBERON:0005352;7.36e-18;1!UBERON:0005904;1.71e-17;4!UBERON:0002784;1.71e-17;4!UBERON:0000007;7.97e-10;2!UBERON:0002133;1.33e-09;2!UBERON:0000058;1.47e-07;10!UBERON:0003135;5.98e-07;11!UBERON:0003978;8.14e-07;3!UBERON:0000946;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.58e-38,4;UBERON:0010133,3.58e-38,4;UBERON:0001905,3.62e-34,2;UBERON:0002757,3.62e-34,2;UBERON:0010134,3.62e-34,2;UBERON:0005408,3.62e-34,2;UBERON:0001899,3.62e-34,2;UBERON:0006947,7.20e-23,3;UBERON:0004054,7.20e-23,3;UBERON:0001894,3.70e-22,7;UBERON:0006222,3.70e-22,7;UBERON:0000998,7.37e-18,1;UBERON:0006868,7.37e-18,1;UBERON:0001000,1.03e-17,1;UBERON:0005352,1.03e-17,1;UBERON:0002784,1.22e-17,4;UBERON:0002135,1.70e-17,1;UBERON:0005904,2.02e-17,4;UBERON:0007023,4.03e-11,114;UBERON:0000007,7.98e-10,2;UBERON:0002133,2.02e-09,2;UBERON:0003135,6.35e-07,11 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,1.79323189425963,0.552567831062295,0,0,0,0,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,1.99052386215701,0,0,0,0,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0,0,1.18375320854817,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.387025325156341,0.219267951258557,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,1.11712960508902,0.687481272035051,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,1.25891011523995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.427149650270779,0,0,0,0.790446527591777,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.310482014706917,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.928067519756987,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,1.60710550763486,1.3451348888753,0,2.50428410486427,0,0,0,0.271878931907327,0.131545547125698,0,0,0.706437835654626,0,0,0,0,0,1.57248397188644,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0.4582137370881,0,0,0.111855431797792,0,0,0,0.718639647993729,0,0,0.233939463462106,0,0.475680363110274,0,0,0,0,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0.281951753939561,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.20686599172379,0.639701945702943,0,0,0.0620747142958579,0,0.763765899337979,0.202117188958219,0.435433495793923,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0.641136984606466 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,1.79323189425963,0.552567831062295,0,0,0,0,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,1.99052386215701,0,0,0,0,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0,0,1.18375320854817,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.387025325156341,0.219267951258557,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,1.11712960508902,0.687481272035051,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,1.25891011523995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.427149650270779,0,0,0,0.790446527591777,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.310482014706917,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.928067519756987,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,1.60710550763486,1.3451348888753,0,2.50428410486427,0,0,0,0.271878931907327,0.131545547125698,0,0,0.706437835654626,0,0,0,0,0,1.57248397188644,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0.4582137370881,0,0,0.111855431797792,0,0,0,0.718639647993729,0,0,0.233939463462106,0,0.475680363110274,0,0,0,0,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0.281951753939561,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.20686599172379,0.639701945702943,0,0,0.0620747142958579,0,0.763765899337979,0.202117188958219,0.435433495793923,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p4@COL4A3 | |||
}} | }} |
Latest revision as of 03:35, 25 September 2015
Short description: | p4@COL4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL4A3_5end |
Coexpression cluster: | NA |
Association with transcript: | -252bp_to_ENST00000315699, ENST00000328380, ENST00000335583, ENST00000396574, ENST00000396578, NM_000091, uc002vom.1, uc002von.1, uc002voo.1, uc002vop.1_5end |
EntrezGene: | COL4A3 |
HGNC: | 2204 |
UniProt: | F8W841E7ENN2F8W849F8W8L3Q01955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.58e-38 | 4 |
neuroendocrine gland | 3.58e-38 | 4 |
pineal body | 3.62e-34 | 2 |
regional part of epithalamus | 3.62e-34 | 2 |
secretory circumventricular organ | 3.62e-34 | 2 |
circumventricular organ | 3.62e-34 | 2 |
epithalamus | 3.62e-34 | 2 |
male genital duct | 7.20e-23 | 3 |
internal male genitalia | 7.20e-23 | 3 |
diencephalon | 3.70e-22 | 7 |
future diencephalon | 3.70e-22 | 7 |
seminal vesicle | 7.37e-18 | 1 |
seminal fluid secreting gland | 7.37e-18 | 1 |
vas deferens | 1.03e-17 | 1 |
spermatic cord | 1.03e-17 | 1 |
regional part of diencephalon | 1.22e-17 | 4 |
mitral valve | 1.70e-17 | 1 |
duct of male reproductive system | 2.02e-17 | 4 |
adult organism | 4.03e-11 | 114 |
pituitary gland | 7.98e-10 | 2 |
atrioventricular valve | 2.02e-09 | 2 |
male reproductive organ | 6.35e-07 | 11 |