FFCP PHASE1:Hg19::chr16:2135090..2135095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7249 | |EntrezGene=7249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12363 | |HGNC=12363 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-207bp_to_S82474_5end | |association_with_transcript=-207bp_to_S82474_5end | ||
|cluster_id=chr16:2135090..2135095,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_22_at_TSC2_5end | |description=CAGE_peak_22_at_TSC2_5end | ||
|id=chr16:2135090..2135095,+ | |id=chr16:2135090..2135095,+ | ||
|ontology_enrichment_celltype=CL:0000313!7.72e-21!1;CL:0000242!3.70e-11!2;CL:0000159!4.09e-11!2 | |ontology_enrichment_celltype=CL:0000313!7.72e-21!1;CL:0000242!3.70e-11!2;CL:0000159!4.09e-11!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-88;3 | |||
|ontology_enrichment_disease=DOID:2152!7.72e-21!1;DOID:1909!3.02e-11!2 | |ontology_enrichment_disease=DOID:2152!7.72e-21!1;DOID:1909!3.02e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!1.13e-30!6;UBERON:0006215!1.13e-30!6;UBERON:0004733!7.25e-27!12;UBERON:0002028!7.25e-27!12;UBERON:0007277!7.25e-27!12;UBERON:0004732!7.68e-25!13;UBERON:0003076!1.35e-21!15;UBERON:0003057!1.35e-21!15;UBERON:0001301!2.82e-21!1;UBERON:0004911!7.72e-21!1;UBERON:0002680!1.02e-20!9;UBERON:0001895!1.02e-20!9;UBERON:0010092!1.02e-20!9;UBERON:0000007!2.23e-11!2;UBERON:0004909!4.09e-11!2;UBERON:0001049!9.95e-09!57;UBERON:0005068!9.95e-09!57;UBERON:0006241!9.95e-09!57;UBERON:0007135!9.95e-09!57;UBERON:0002616!1.94e-08!59;UBERON:0006947!5.54e-08!3;UBERON:0004054!5.54e-08!3;UBERON:0001896!8.29e-08!3;UBERON:0005290!8.29e-08!3;UBERON:0010096!8.29e-08!3;UBERON:0000955!3.87e-07!69;UBERON:0006238!3.87e-07!69;UBERON:0000992!5.42e-07!13 | |ontology_enrichment_uberon=UBERON:0002037!1.13e-30!6;UBERON:0006215!1.13e-30!6;UBERON:0004733!7.25e-27!12;UBERON:0002028!7.25e-27!12;UBERON:0007277!7.25e-27!12;UBERON:0004732!7.68e-25!13;UBERON:0003076!1.35e-21!15;UBERON:0003057!1.35e-21!15;UBERON:0001301!2.82e-21!1;UBERON:0004911!7.72e-21!1;UBERON:0002680!1.02e-20!9;UBERON:0001895!1.02e-20!9;UBERON:0010092!1.02e-20!9;UBERON:0000007!2.23e-11!2;UBERON:0004909!4.09e-11!2;UBERON:0001049!9.95e-09!57;UBERON:0005068!9.95e-09!57;UBERON:0006241!9.95e-09!57;UBERON:0007135!9.95e-09!57;UBERON:0002616!1.94e-08!59;UBERON:0006947!5.54e-08!3;UBERON:0004054!5.54e-08!3;UBERON:0001896!8.29e-08!3;UBERON:0005290!8.29e-08!3;UBERON:0010096!8.29e-08!3;UBERON:0000955!3.87e-07!69;UBERON:0006238!3.87e-07!69;UBERON:0000992!5.42e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.76e-45;6!UBERON:0000007;7.05e-34;2!UBERON:0002680;2.66e-30;9!UBERON:0001895;2.66e-30;9!UBERON:0004733;4.59e-23;12!UBERON:0002028;4.59e-23;12!UBERON:0004732;2.16e-21;13!UBERON:0003296;1.03e-17;4!UBERON:0010133;1.03e-17;4!UBERON:0001894;9.89e-11;7!UBERON:0000073;5.40e-09;53!UBERON:0002616;5.40e-09;53!UBERON:0001017;4.29e-08;75!UBERON:0001016;1.07e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0000007,7.05e-34,2;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p22@TSC2 | |short_description=p22@TSC2 | ||
}} | }} |
Latest revision as of 03:55, 25 September 2015
Short description: | p22@TSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TSC2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -207bp_to_S82474_5end |
EntrezGene: | TSC2 |
HGNC: | 12363 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
pituitary gland | 7.05e-34 | 2 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |