FFCP PHASE1:Hg19::chr1:10057123..10057149,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:10057123..10057149,+ to FFCP PHASE1:Hg19::chr1:10057123..10057149,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116362 | |EntrezGene=116362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30316 | |HGNC=30316 | ||
|TSSclassifier=strong | |||
|UniProt=Q96R05 | |UniProt=Q96R05 | ||
|association_with_transcript=-105bp_to_NM_052960,uc001aqq.2,uc009vms.2_5end | |||
|cluster_id=chr1:10057123..10057149,+ | |||
|coexpression_cluster_id=C303 | |||
|description=CAGE_peak_3_at_RBP7_5end | |||
|id=chr1:10057123..10057149,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.05e-39!42;CL:0000766!1.19e-39!76;CL:0002194!1.87e-36!63;CL:0000576!1.87e-36!63;CL:0000040!1.87e-36!63;CL:0000559!1.87e-36!63;CL:0000860!1.07e-35!45;CL:0002009!1.32e-34!65;CL:0000839!1.81e-30!70;CL:0000557!1.02e-29!71;CL:0000738!2.61e-21!140;CL:0000763!2.63e-19!112;CL:0000049!2.63e-19!112;CL:0002087!6.36e-19!119;CL:0002031!1.58e-14!124;CL:0000037!2.69e-13!172;CL:0000566!2.69e-13!172;CL:0000988!3.72e-12!182;CL:0002032!3.97e-11!165;CL:0000837!3.97e-11!165;CL:0002393!1.96e-10!9;CL:0002397!1.96e-10!9;CL:0000094!2.17e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.96e-53;33!CL:0002057;1.96e-53;33!CL:0000576;6.14e-48;48!CL:0000473;4.42e-43;39!CL:0000234;4.42e-43;39!CL:0000766;2.17e-35;69!CL:0000094;6.58e-17;8!CL:0000763;2.22e-15;100!CL:0002393;2.27e-13;6!CL:0002397;2.27e-13;6!CL:0002087;1.39e-12;104!CL:0000081;8.95e-12;11!CL:0000738;1.16e-09;136!CL:0000767;1.78e-07;3!CL:0000875;2.57e-07;3!CL:0002396;2.57e-07;3!CL:0000775;3.09e-07;3!CL:0000226;6.92e-07;3!CL:0000842;6.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.06e-77,42;CL:0002057,7.06e-77,42;CL:0000473,2.80e-75,48;CL:0000234,2.80e-75,48;CL:0000766,2.02e-74,72;CL:0002194,1.29e-65,59;CL:0000576,1.29e-65,59;CL:0000040,1.29e-65,59;CL:0000559,1.29e-65,59;CL:0002009,5.44e-63,61;CL:0000839,4.10e-57,66;CL:0000557,4.82e-56,67;CL:0000763,6.12e-44,108;CL:0000049,6.12e-44,108;CL:0000738,1.48e-40,136;CL:0002087,4.31e-34,115;CL:0000037,2.38e-29,168;CL:0000988,5.52e-28,177;CL:0002031,1.86e-27,120;CL:0002032,3.21e-26,161;CL:0000837,3.21e-26,161;CL:0002393,5.55e-19,9;CL:0002397,5.55e-19,9;CL:0000094,6.23e-17,8;CL:0000081,8.62e-12,11;CL:0000767,1.77e-07,3;CL:0000875,2.61e-07,3;CL:0002396,2.61e-07,3;CL:0000775,3.00e-07,3;CL:0000226,7.65e-07,3;CL:0000842,7.65e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.23e-55;42!CL:0000049;4.93e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-32!102;UBERON:0003061!2.11e-32!102;UBERON:0002193!1.76e-30!112;UBERON:0007023!6.21e-25!115;UBERON:0002371!9.34e-25!80;UBERON:0001474!1.78e-22!86;UBERON:0002405!4.32e-19!115;UBERON:0004765!6.78e-18!101;UBERON:0001434!6.78e-18!101;UBERON:0003081!8.95e-12!216;UBERON:0000178!2.02e-08!15;UBERON:0000179!2.02e-08!15;UBERON:0000463!2.02e-08!15;UBERON:0000062!3.90e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-16;15!UBERON:0000179;1.78e-16;15!UBERON:0000463;1.78e-16;15!UBERON:0002390;2.94e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.76e-62,98;UBERON:0003061,2.76e-62,98;UBERON:0002193,8.21e-55,108;UBERON:0002371,1.14e-47,76;UBERON:0001474,4.17e-43,82;UBERON:0002405,6.70e-40,93;UBERON:0004765,5.70e-38,90;UBERON:0001434,1.03e-32,100;UBERON:0003081,1.75e-27,203;UBERON:0000178,1.75e-16,15;UBERON:0000179,1.75e-16,15;UBERON:0000463,1.75e-16,15;UBERON:0002204,1.32e-15,167;UBERON:0000926,8.08e-15,315;UBERON:0004120,8.08e-15,315;UBERON:0006603,8.08e-15,315 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,30.6824135942145,13.8178583314997,28.0217183202098,0,0,0,0,0,0.293600439334847,28.2537658351257,19.2522669571336,18.2289131401316,3.80656306207871,3.56283032620878,2.31818010870768,5.52513307362346,11.3362783106643,4.60909716256851,6.97287110717054,5.75635043230556,7.43295290148249,5.75384784644301,11.7833925003386,11.8241114944293,7.23965929546899,5.80936215225443,8.12558919566051,6.02375486536335,9.5517152520246,6.96642801779762,5.50951006267625,9.9487998393589,3.83602275479425,5.93732340336089,9.77371922345996,5.11469700639233,5.5139755339431,7.37600792098482,4.35975574296902,9.54744927975624,18.7733850631273,13.6828972164223,4.23779651843358,8.47038562771399,4.74693581161327,26.6181660753047,27.0007460955605,30.6101622442229,43.5835088848401,38.7456383531086,52.8787180233394,18.2408155994399,16.9079175619227,14.9784606087,0,0,0.889509253863555,2.13365111283254,0,0,0.661044872784862,0,0,0,0.382273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,2.86092726247768,0.76791966692651,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0.174129737299267,0.398873881556595,0.953962497221368,2.85997455390064,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4492584410489,27.1446184903828,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.487894824518382,1.19276791489337,0.348581828608555,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.738651018262192,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0.788123040807709,0,0.77005821767849,0,0,0,0,0,16.478154526838,11.966458368161,16.9910360508775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1993135412504,10.138567438475,5.22965033236877,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.539107359730903,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,1.00337954770971,0.254876273045038,0,0,0,0,1.28225062558195,0.328014645699706,0.325378394664303,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.60044461320525,0,0,0,0,5.58192370155386,3.0585488285695,6.83576624608995,7.14695326373367,4.93634727703433,6.48473311192717,5.94034580961926,8.72437693923697,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,4.68826173670061,0,0,0,0,0.890894042497916,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,1.39473591775749,0,0,0,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0.0927680981618513,0,0,0,5.79999660347835,0,0,0,1.03423011972439,0,0,0,0.482385754501632,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,1.32686346755009,0.611030144933625,0,0,0,0.539209063845416,1.60515529459758,0.468528891450678,0,0,0,0.394584402849391,0,0,3.28570214068137,0.450970258243478,0.518440956986236,0,0,0,0,0,0,0.347119476670262,0,0,0.873633341210151,1.0319161948297,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.189932387867636,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0.49701014226173,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,1.39641200636127,0.458320848023367,1.43574604915363,1.39775300349294,0.429226048136571,2.23171457441873,1.61240333968143,0,0,0.157566364614447,0,0,0,0,0,0.272406812223151,0.643012593860077,1.65047323916681,1.66176135211674,0,0,0.121499113316049,0,0.86686278029118,0.83927341015997,0,0,0.191915197319445,3.57347663186684,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,1.90517903781507,0,0.129282956361551,0.39669780522807,0,0,2.13574825135389,0.628817220398664,0.828478110694391,0.992332043623902,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,1.31149052283922,0,0.886068179966986,0.122026264901963,0,0,0,0.372578417648301,1.93688088910723,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,0,0.690860683462397,0,0.276516872303462,0,0,0,0,0,0,0,1.49368421571797,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0.558644917973244,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0.353909170043221,0,0,0,0.690359926060101,0,0.82731361184183,0,0,0,0.163771917510097,0,0.337687923091973,0.781078098613847,0,0.253663240775627,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,1.1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| ||
|short_description=p3@RBP7 | |||
}} | }} |
Latest revision as of 04:01, 25 September 2015
Short description: | p3@RBP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBP7_5end |
Coexpression cluster: | C303_CD14_Basophils_Peripheral_Eosinophils_CD14CD16_Neutrophils_Whole |
Association with transcript: | -105bp_to_NM_052960, uc001aqq.2, uc009vms.2_5end |
EntrezGene: | RBP7 |
HGNC: | 30316 |
UniProt: | Q96R05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.76e-62 | 98 |
blood island | 2.76e-62 | 98 |
hemolymphoid system | 8.21e-55 | 108 |
bone marrow | 1.14e-47 | 76 |
bone element | 4.17e-43 | 82 |
immune system | 6.70e-40 | 93 |
skeletal element | 5.70e-38 | 90 |
skeletal system | 1.03e-32 | 100 |
lateral plate mesoderm | 1.75e-27 | 203 |
blood | 1.75e-16 | 15 |
haemolymphatic fluid | 1.75e-16 | 15 |
organism substance | 1.75e-16 | 15 |
musculoskeletal system | 1.32e-15 | 167 |
mesoderm | 8.08e-15 | 315 |
mesoderm-derived structure | 8.08e-15 | 315 |
presumptive mesoderm | 8.08e-15 | 315 |