FFCP PHASE1:Hg19::chr5:140856127..140856230,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:140856127..140856230,+ to FFCP PHASE1:Hg19::chr5:140856127..140856230,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5098 | |EntrezGene=5098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8716 | |HGNC=8716 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UN70 | |UniProt=Q9UN70 | ||
|association_with_transcript=443bp_to_AF152337,AF152524,CU676422,CU693162,DQ893469,DQ896354_5end | |||
|cluster_id=chr5:140856127..140856230,+ | |||
|description=CAGE_peak_2_at_PCDHGC3_5end | |||
|id=chr5:140856127..140856230,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.73e-32!180;CL:0000057!6.98e-12!75;CL:0000183!4.78e-11!59;CL:0000393!6.32e-11!60;CL:0000211!6.32e-11!60;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000187!8.79e-10!54;CL:0000133!3.51e-08!59;CL:0000221!6.54e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.38e-10,76;CL:0000133,2.18e-08,59;CL:0000680,4.89e-08,58;CL:0000056,4.89e-08,58;CL:0000355,4.89e-08,58;CL:0000393,1.44e-07,61;CL:0000211,1.44e-07,61;CL:0000187,5.13e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.47e-27!82;UBERON:0005743!1.79e-25!86;UBERON:0000073!5.93e-24!94;UBERON:0001016!5.93e-24!94;UBERON:0001049!1.30e-22!57;UBERON:0005068!1.30e-22!57;UBERON:0006241!1.30e-22!57;UBERON:0007135!1.30e-22!57;UBERON:0002616!3.62e-22!59;UBERON:0000033!5.10e-22!123;UBERON:0000955!7.72e-22!69;UBERON:0006238!7.72e-22!69;UBERON:0004121!1.54e-21!169;UBERON:0000924!3.58e-21!173;UBERON:0006601!3.58e-21!173;UBERON:0000153!7.66e-21!129;UBERON:0007811!7.66e-21!129;UBERON:0000475!3.80e-20!365;UBERON:0003075!1.58e-19!86;UBERON:0007284!1.58e-19!86;UBERON:0002346!8.38e-19!90;UBERON:0000119!4.28e-17!312;UBERON:0002780!8.31e-17!41;UBERON:0001890!8.31e-17!41;UBERON:0006240!8.31e-17!41;UBERON:0000483!2.47e-16!309;UBERON:0003080!6.72e-16!42;UBERON:0000481!2.18e-15!347;UBERON:0001893!6.85e-15!34;UBERON:0000914!8.11e-15!83;UBERON:0002329!8.11e-15!83;UBERON:0003077!8.11e-15!83;UBERON:0003059!8.11e-15!83;UBERON:0007282!8.11e-15!83;UBERON:0009618!8.11e-15!83;UBERON:0007285!8.11e-15!83;UBERON:0002791!2.25e-14!33;UBERON:0000477!2.67e-14!286;UBERON:0002020!2.82e-14!34;UBERON:0003528!2.82e-14!34;UBERON:0003056!4.95e-14!61;UBERON:0001869!5.30e-14!32;UBERON:0000025!5.66e-13!194;UBERON:0004111!1.67e-12!241;UBERON:0004290!4.10e-11!70;UBERON:0000956!7.08e-11!25;UBERON:0000203!7.08e-11!25;UBERON:0000486!4.29e-10!82;UBERON:0002619!4.59e-10!22;UBERON:0001950!2.89e-09!20;UBERON:0007023!3.31e-09!115;UBERON:0001134!5.37e-09!61;UBERON:0002036!5.37e-09!61;UBERON:0003082!5.37e-09!61;UBERON:0000468!6.28e-09!659;UBERON:0002385!1.07e-08!63;UBERON:0001015!1.07e-08!63;UBERON:0000383!1.07e-08!63;UBERON:0000467!2.86e-08!625;UBERON:0000480!4.24e-08!626;UBERON:0003076!5.29e-08!15;UBERON:0003057!5.29e-08!15;UBERON:0005256!8.85e-08!143;UBERON:0000922!2.19e-07!612;UBERON:0002050!2.83e-07!605;UBERON:0005423!2.83e-07!605;UBERON:0000923!4.22e-07!604;UBERON:0005291!4.22e-07!604;UBERON:0006598!4.22e-07!604;UBERON:0002532!4.22e-07!604;UBERON:0000064!7.78e-07!219;UBERON:0004732!8.70e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.20e-17;34!UBERON:0001869;8.62e-17;32!UBERON:0002791;1.61e-16;32!UBERON:0003528;1.62e-16;34!UBERON:0002020;1.62e-16;34!UBERON:0000073;1.82e-16;53!UBERON:0002616;1.82e-16;53!UBERON:0002780;1.62e-15;41!UBERON:0001890;1.62e-15;41!UBERON:0000956;2.26e-14;25!UBERON:0000203;2.26e-14;25!UBERON:0001017;1.34e-13;75!UBERON:0000955;1.78e-13;68!UBERON:0002619;3.09e-13;22!UBERON:0001950;4.05e-12;20!UBERON:0001016;5.53e-12;83!UBERON:0000075;1.38e-08;16!UBERON:0004732;1.59e-08;13!UBERON:0004733;3.69e-08;12!UBERON:0002028;3.69e-08;12!UBERON:0010314;4.74e-07;132!UBERON:0002680;6.26e-07;9!UBERON:0001895;6.26e-07;9!UBERON:0001434;7.16e-07;36!UBERON:0011216;9.70e-07;132 | |||
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| ||
|short_description=p2@PCDHGC3 | |||
}} | }} |
Latest revision as of 04:30, 25 September 2015
Short description: | p2@PCDHGC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDHGC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 443bp_to_AF152337, AF152524, CU676422, CU693162, DQ893469, DQ896354_5end |
EntrezGene: | PCDHGC3 |
HGNC: | 8716 |
UniProt: | Q9UN70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.38e-10 | 76 |
neurectodermal cell | 2.18e-08 | 59 |
muscle precursor cell | 4.89e-08 | 58 |
myoblast | 4.89e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-08 | 58 |
electrically responsive cell | 1.44e-07 | 61 |
electrically active cell | 1.44e-07 | 61 |
muscle cell | 5.13e-07 | 55 |