FFCP PHASE1:Hg19::chr1:218519057..218519070,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11768 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-320bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | |||
|cluster_id=chr1:218519057..218519070,+ | |||
|coexpression_cluster_id=C2566 | |||
|description=CAGE_peak_11_at_TGFB2_5end | |||
|id=chr1:218519057..218519070,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.46e-10;3!CL:0000067;1.46e-10;3!CL:0005012;1.46e-10;3!CL:0002304;1.46e-10;3!CL:1000746;4.19e-07;7!CL:1000612;4.19e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.11e-10,3;CL:0000067,2.11e-10,3;CL:0005012,2.11e-10,3;CL:0002304,2.11e-10,3;CL:1000746,6.20e-07,7;CL:1000612,6.20e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!5.54e-20!286;UBERON:0000119!7.68e-17!312;UBERON:0004111!1.48e-16!241;UBERON:0000153!6.29e-16!129;UBERON:0007811!6.29e-16!129;UBERON:0000483!1.26e-15!309;UBERON:0000033!1.52e-15!123;UBERON:0000025!2.45e-15!194;UBERON:0003075!7.03e-15!86;UBERON:0007284!7.03e-15!86;UBERON:0002346!1.21e-14!90;UBERON:0000481!2.28e-14!347;UBERON:0005743!1.29e-13!86;UBERON:0001017!2.16e-13!82;UBERON:0000955!8.00e-13!69;UBERON:0006238!8.00e-13!69;UBERON:0000924!6.53e-12!173;UBERON:0006601!6.53e-12!173;UBERON:0004121!6.70e-12!169;UBERON:0002616!1.10e-11!59;UBERON:0000073!1.18e-11!94;UBERON:0001016!1.18e-11!94;UBERON:0000475!3.52e-11!365;UBERON:0001049!1.34e-10!57;UBERON:0005068!1.34e-10!57;UBERON:0006241!1.34e-10!57;UBERON:0007135!1.34e-10!57;UBERON:0003056!3.31e-09!61;UBERON:0002050!2.90e-08!605;UBERON:0005423!2.90e-08!605;UBERON:0000922!3.32e-08!612;UBERON:0003914!4.40e-08!118;UBERON:0002020!4.43e-08!34;UBERON:0003528!4.43e-08!34;UBERON:0000923!4.97e-08!604;UBERON:0005291!4.97e-08!604;UBERON:0006598!4.97e-08!604;UBERON:0002532!4.97e-08!604;UBERON:0002780!5.24e-08!41;UBERON:0001890!5.24e-08!41;UBERON:0006240!5.24e-08!41;UBERON:0001893!6.98e-08!34;UBERON:0000468!7.25e-08!659;UBERON:0002791!9.95e-08!33;UBERON:0003080!1.30e-07!42;UBERON:0002200!1.57e-07!11;UBERON:0006876!1.57e-07!11;UBERON:0000948!1.75e-07!24;UBERON:0005498!1.75e-07!24;UBERON:0004140!1.75e-07!24;UBERON:0009881!1.75e-07!24;UBERON:0004141!1.75e-07!24;UBERON:0003084!1.75e-07!24;UBERON:0007005!1.75e-07!24;UBERON:0004139!1.75e-07!24;UBERON:0004291!1.75e-07!24;UBERON:0001869!2.40e-07!32;UBERON:0007023!5.41e-07!115;UBERON:0000467!6.00e-07!625;UBERON:0000480!7.55e-07!626;UBERON:0002049!7.86e-07!79;UBERON:0007798!7.86e-07!79;UBERON:0004535!8.24e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.12e-13;4!UBERON:0001778;1.46e-10;3!UBERON:0001775;1.46e-10;3!UBERON:0007625;4.44e-10;11!UBERON:0006876;8.42e-10;11!UBERON:0002203;8.04e-09;6!UBERON:0001768;8.04e-09;6!UBERON:0002200;8.04e-09;6!UBERON:0000074;4.19e-07;7!UBERON:0001229;4.19e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,8.52e-13,4;UBERON:0001778,2.11e-10,3;UBERON:0001775,2.11e-10,3;UBERON:0007625,5.58e-10,11;UBERON:0006876,7.83e-10,11;UBERON:0002203,1.54e-08,6;UBERON:0001768,1.54e-08,6;UBERON:0002200,1.54e-08,6;UBERON:0003914,2.37e-07,117;UBERON:0000058,3.70e-07,19;UBERON:0010532,6.20e-07,7;UBERON:0000074,6.20e-07,7;UBERON:0001229,6.20e-07,7;UBERON:0001230,6.20e-07,7;UBERON:0003220,6.20e-07,7;UBERON:0005749,6.20e-07,7;UBERON:0004199,6.20e-07,7;UBERON:0004209,6.20e-07,7;UBERON:0004198,6.20e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,1.30592814099919,0.982935746006035,1.39560233594486,0,0,0,0,0,1.20538905604795,0,0,0.492484232307152,1.42800483870977,0.940364164434263,1.43117993565528,0.410623275218653,3.13856598987007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,2.3858578411533,0,1.13441780596881,2.4390233720882,3.24988707064566,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.633152558322899,0.397227542439656,1.43418310374407,0.709336764396714,0.560677600142307,4.2699598291882,0.98667019366864,0.311211035399766,0.538842688278752,0.326923806226917,1.96764655938411,0,0,0,0,0,0,0,0,0.408308342509787,0,1.03325781175765,0,0.247266929278557,0,0,0,0,0,1.31693286264251,1.5324389789951,1.20190447125277,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.579652024875384,9.51010423310155,0,0.462985512576611,0.761016608938393,0.790204397959275,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,4.79556075716608,0.36669142910475,0.387815147273333,0,0,0.531876233169741,0,0.514414748524284,0,0,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,0.399891964728228,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0.623912584592421,0.356857977594324,1.10391690523754,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0,0.391602314925481,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0.784349769176855,1.46139224653261,0,0,0,1.0795795805107,1.54227252690289,0.541892875087706,1.00337954770971,0,0.831076008928724,0,0,0,0,1.64007322849853,0,0,0.183138929636687,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0,0,0,0.356128142586949,0,0.384380134730212,0.127612712494584,0,0,0,0,2.15623506123262,0.532306030317022,0.869932992075073,0,1.28812398067792,1.48863347743867,0.949138274156178,0.571890581771475,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.974853958525138,0,0.136499911407986,0,1.13008116620243,0,1.32687795048244,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,1.8667317792493,1.426684205925,0,0.422215270595328,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,1.70481688083848,0,0,0,0,0.562677665642051,0.111308705022906,0,1.68900326502395,0.398495976502139,0.276283915531148,0,0,0,0.622079175323615,0.539210106883961,0,0,0.493217028184668,0,1.11136990144637,0,0.556608588971108,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.538651809526579,3.41826167541004,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0,0,0,0.19566461893209,0.242780379534093,0.789168805698781,0,0,0.379119477770928,0,0,0.664653872707185,0.330991955875499,1.56966459203613,0,0.284609546029793,0,0,0.0979923974143777,0.261177619741208,0.52418000472609,0.51595809741485,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.316553979779393,0,18.1158933768466,0,0.799238438328521,0,2.74887830798198,0.171594997861965,0,0.372757606696298,0,0.951329442515298,1.04602846312333,2.54995544090804,0.577901179803038,1.20084057741958,0.547621515567972,0,0,0,0.279282401272254,0.687481272035051,1.43574604915363,0,0,0,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,1.19271615249795,1.01980882368113,0,0,1.16354660725395,0.13223260174269,0.171086837884329,0.704815022316672,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.751145584238999,0.573409195690071,0.443716206147409,0.620964029413834,0,3.12451019905266,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0.604923695052956,0.15543720058278,0.295710299979268,0.477890301491107,0,0.465788870628778,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0.406870733204662,0,0.322231671127465,0,1.19428766609585,0.800055529326307,0.686791410365586,0,5.04739592914604,0.192619830407303,0,0.782982875895635,1.58694147858591,0,0.489473409012935,0.71635536432595,0,0.219284049578707,0.353378291891762,0,0,0,0.690860683462397,0,0.553033744606923,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,1.8374728641192,0.321146125482298,0,1.11743701340006,0.41023272848151,0,0.414943514785307,0.484426936895553,0,0,0.11796972334774,0,0.115525666150338,3.81382095467167,0,0.596748666348824,0.451261970095544,1.0085253435176,0,0,0.655087670040387,2.95712172434091,0.135075169236789,0.781078098613847,0.206686796501184,0.317079050969534,0,0.548257766857182,0,0.351742488719241,1.66091155931474,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,1.02892805662451,0.135939465953663,0.460409414939944,0.354581522651905,0.111231401892069,0.549451649953598,0.157115589916002,0,0,0.647782773655864,0,0.500335809236594,0,0,0.173858272302579,0.801711364730253,0,0,0,0.430227358820278,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0.718639647993729,0,1.45713297917742,0,0.198950775161368,0,0,0,0,0,0,0,0.490296643507811,0,0.785233868459781,1.48523200163543,0,0.509781344063451,0,0.386747327841463,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.407948941145488,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.852935927603924,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0.665320713092027,0,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p11@TGFB2 | |||
}} |
Latest revision as of 04:31, 25 September 2015
Short description: | p11@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TGFB2_5end |
Coexpression cluster: | C2566_Lens_gall_papillotubular_anaplastic_Ciliary_osteoclastoma_alveolar |
Association with transcript: | -320bp_to_uc001hll.2, uc001hlm.2, uc001hln.2, uc001hlo.2, uc010pue.1_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.11e-10 | 3 |
ciliated epithelial cell | 2.11e-10 | 3 |
multi-ciliated epithelial cell | 2.11e-10 | 3 |
non-pigmented ciliary epithelial cell | 2.11e-10 | 3 |
glomerular cell | 6.20e-07 | 7 |
kidney corpuscule cell | 6.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 8.52e-13 | 4 |
ciliary epithelium | 2.11e-10 | 3 |
ciliary body | 2.11e-10 | 3 |
pigment epithelium of eye | 5.58e-10 | 11 |
vasculature of organ | 7.83e-10 | 11 |
vasculature of eye | 1.54e-08 | 6 |
uvea | 1.54e-08 | 6 |
vasculature of head | 1.54e-08 | 6 |
epithelial tube | 2.37e-07 | 117 |
duct | 3.70e-07 | 19 |
primitive nephron | 6.20e-07 | 7 |
renal glomerulus | 6.20e-07 | 7 |
renal corpuscle | 6.20e-07 | 7 |
glomerular capsule | 6.20e-07 | 7 |
metanephric mesenchyme | 6.20e-07 | 7 |
glomerular tuft | 6.20e-07 | 7 |
S-shaped body | 6.20e-07 | 7 |
renal vesicle | 6.20e-07 | 7 |
comma-shaped body | 6.20e-07 | 7 |