FFCP PHASE1:Hg19::chr19:11308190..11308244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25959 | |EntrezGene=25959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29300 | |HGNC=29300 | ||
|TSSclassifier=strong | |||
|UniProt=Q63ZY3 | |UniProt=Q63ZY3 | ||
|association_with_transcript=0bp_to_ENST00000432929,NM_001136191,uc002mqo.3,uc010dxv.2_5end | |association_with_transcript=0bp_to_ENST00000432929,NM_001136191,uc002mqo.3,uc010dxv.2_5end | ||
|cluster_id=chr19:11308190..11308244,- | |||
|description=CAGE_peak_1_at_KANK2_5end | |description=CAGE_peak_1_at_KANK2_5end | ||
|id=chr19:11308190..11308244,- | |id=chr19:11308190..11308244,- | ||
|ontology_enrichment_celltype=CL:0000055!4.88e-27!180;CL:0000057!6.84e-17!75;CL:0000183!1.33e-09!59;CL:0000680!3.76e-09!57;CL:0000056!3.76e-09!57;CL:0000355!3.76e-09!57;CL:0000187!2.43e-08!54;CL:0002620!3.18e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.88e-27!180;CL:0000057!6.84e-17!75;CL:0000183!1.33e-09!59;CL:0000680!3.76e-09!57;CL:0000056!3.76e-09!57;CL:0000355!3.76e-09!57;CL:0000187!2.43e-08!54;CL:0002620!3.18e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.25e-07;23!CL:0000057;4.05e-07;73!CL:0002320;5.24e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.98e-17,76;CL:0000680,1.25e-09,58;CL:0000056,1.25e-09,58;CL:0000355,1.25e-09,58;CL:0000187,8.26e-09,55;CL:0002620,3.12e-07,23;CL:0000192,5.96e-07,43;CL:0000514,5.96e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.80e-13!143;UBERON:0002100!6.42e-13!216;UBERON:0000475!5.59e-12!365;UBERON:0000914!6.72e-12!83;UBERON:0002329!6.72e-12!83;UBERON:0003077!6.72e-12!83;UBERON:0003059!6.72e-12!83;UBERON:0007282!6.72e-12!83;UBERON:0009618!6.72e-12!83;UBERON:0007285!6.72e-12!83;UBERON:0004290!4.83e-11!70;UBERON:0000481!5.92e-11!347;UBERON:0002385!1.09e-10!63;UBERON:0001015!1.09e-10!63;UBERON:0000383!1.09e-10!63;UBERON:0000468!2.53e-10!659;UBERON:0001134!4.01e-10!61;UBERON:0002036!4.01e-10!61;UBERON:0003082!4.01e-10!61;UBERON:0003104!1.11e-09!238;UBERON:0009142!1.11e-09!238;UBERON:0000486!5.31e-09!82;UBERON:0003103!6.89e-08!69;UBERON:0007100!8.01e-08!27;UBERON:0003914!6.93e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.08e-07;25!UBERON:0002384;6.02e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.48e-15,160;UBERON:0009142,1.48e-15,160;UBERON:0005256,1.14e-12,122;UBERON:0007524,1.42e-11,73;UBERON:0007503,1.52e-11,78;UBERON:0002329,1.57e-11,71;UBERON:0003059,1.57e-11,71;UBERON:0007282,1.57e-11,71;UBERON:0004290,1.57e-11,71;UBERON:0009618,1.57e-11,71;UBERON:0003077,2.29e-11,72;UBERON:0007285,2.29e-11,72;UBERON:0002100,3.24e-11,199;UBERON:0002385,3.46e-11,64;UBERON:0001015,3.46e-11,64;UBERON:0000383,3.46e-11,64;UBERON:0001134,1.30e-10,62;UBERON:0002036,1.30e-10,62;UBERON:0003082,1.30e-10,62;UBERON:0000486,1.99e-09,83;UBERON:0007100,7.85e-08,27;UBERON:0003103,1.72e-07,68 | |||
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| ||
|short_description=p1@KANK2 | |short_description=p1@KANK2 | ||
}} | }} |
Latest revision as of 04:31, 25 September 2015
Short description: | p1@KANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KANK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432929, NM_001136191, uc002mqo.3, uc010dxv.2_5end |
EntrezGene: | KANK2 |
HGNC: | 29300 |
UniProt: | Q63ZY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.98e-17 | 76 |
muscle precursor cell | 1.25e-09 | 58 |
myoblast | 1.25e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-09 | 58 |
muscle cell | 8.26e-09 | 55 |
skin fibroblast | 3.12e-07 | 23 |
smooth muscle cell | 5.96e-07 | 43 |
smooth muscle myoblast | 5.96e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.48e-15 | 160 |
entire embryonic mesenchyme | 1.48e-15 | 160 |
trunk mesenchyme | 1.14e-12 | 122 |
dense mesenchyme tissue | 1.42e-11 | 73 |
epithelial vesicle | 1.52e-11 | 78 |
somite | 1.57e-11 | 71 |
presomitic mesoderm | 1.57e-11 | 71 |
presumptive segmental plate | 1.57e-11 | 71 |
dermomyotome | 1.57e-11 | 71 |
trunk paraxial mesoderm | 1.57e-11 | 71 |
paraxial mesoderm | 2.29e-11 | 72 |
presumptive paraxial mesoderm | 2.29e-11 | 72 |
trunk | 3.24e-11 | 199 |
muscle tissue | 3.46e-11 | 64 |
musculature | 3.46e-11 | 64 |
musculature of body | 3.46e-11 | 64 |
skeletal muscle tissue | 1.30e-10 | 62 |
striated muscle tissue | 1.30e-10 | 62 |
myotome | 1.30e-10 | 62 |
multilaminar epithelium | 1.99e-09 | 83 |
primary circulatory organ | 7.85e-08 | 27 |
compound organ | 1.72e-07 | 68 |