FFCP PHASE2:Hg19::chr4:13546130..13546145,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:579 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:951 |T...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=951 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P78367 | ||
|association_with_transcript=-16bp_to_NM_001189,uc003gmx.2_5end | |association_with_transcript=-16bp_to_NM_001189,uc003gmx.2_5end | ||
|cluster_id=chr4:13546130..13546145,- | |cluster_id=chr4:13546130..13546145,- |
Latest revision as of 04:48, 25 September 2015
Short description: | p4@NKX3-2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NKX3-2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_NM_001189, uc003gmx.2_5end |
EntrezGene: | NKX3-2 |
HGNC: | 951 |
UniProt: | P78367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@NKX3-2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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annulus pulposus cell | 1.46e-50 | 2 |
nucleus pulposus cell of intervertebral disc | 2.09e-33 | 3 |
fibroblast of lymphatic vessel | 1.21e-13 | 2 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.06e-78 | 5 |
symphysis | 1.06e-78 | 5 |
nonsynovial joint | 1.06e-78 | 5 |
fibrous joint | 1.06e-78 | 5 |
cartilaginous joint | 1.06e-78 | 5 |
developing mesenchymal condensation | 1.06e-78 | 5 |
pre-cartilage condensation | 1.06e-78 | 5 |
cartilaginous condensation | 1.06e-78 | 5 |
cartilage element | 1.06e-78 | 5 |
post-cranial axial skeletal system | 1.06e-78 | 5 |
Showing 1 to 10 of 29 entries